EST details — SGN-E674669
| Search information |
| Request: 674669 | Match: SGN-E674669 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C463337 | Clone name: cccs46w27l19 |
| ||
| Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E674669 | Length: 885 bp (1629 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E674669 [] (trimmed)
GCTGTGGGGGTATTGAACTGTATTTATTAATTGATTAATACATCAATGGCGGCACCACCGGCGAGGGCTCGAGCGGACTACGATTACCTCATAAA
ACTTCTACTCATCGGCGATAGTGGTGTGGGTAAGAGTTGCCTTCTTTTGCGTTTTTCAGATGGTTCCTTCACGACCAGTTTTATCACAACCATAG
GAATTGATTTCAAGATAAGAACCATTGAGCTTGATGGCAAGCGGATCAAACTCCAAATCTGGGATACTGCTGGTCAGGAACGGTTCAGAACGATC
ACCACTGCTTATTATCGTGGAGCTATGGGAATATTGTTGGTCTATGATGTTACAGATGAATCATCCTTCAATAATATTAGGAACTGGATTCGTAA
CATTGAACAGCATGCATCTGACAATGTCAACAAGATTCTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTCCCTACCTCAAAGG
GTCAAGCACTTGCTGATGAGTACGGTATCAAATTTTTTGAGACTAGTGCAAAAACAAATCTTAATGTGGAAGAAGTTTTCTTTTCAATAGCAAGG
GACATTAAGCAAAGGCTTGCAGACACGGACTCTAAAGCGGAGGCTTCAACAATCAAAATTAATCAACCGGATCAGGCTGCTGGTGCTGGTCAACT
TGCTCAAAAATCTGCTTGCTGCGGTTCTTGAACTGGAAGAATACTAATGAGCACTTACATCAGGTGCTCAATGACAGGAGAGAACAAAAACAAAA
ACTAATTGTGACGAAACATTGTCGGTGGATGTAATTTAATTAATTGTCATTCTTTAAAAGGACTTATTTTAGTTTGTGTAAGATTGGCTCTTACT
GATCGAGAAACTTGCACTTATNGTGGCCAG
ACTTCTACTCATCGGCGATAGTGGTGTGGGTAAGAGTTGCCTTCTTTTGCGTTTTTCAGATGGTTCCTTCACGACCAGTTTTATCACAACCATAG
GAATTGATTTCAAGATAAGAACCATTGAGCTTGATGGCAAGCGGATCAAACTCCAAATCTGGGATACTGCTGGTCAGGAACGGTTCAGAACGATC
ACCACTGCTTATTATCGTGGAGCTATGGGAATATTGTTGGTCTATGATGTTACAGATGAATCATCCTTCAATAATATTAGGAACTGGATTCGTAA
CATTGAACAGCATGCATCTGACAATGTCAACAAGATTCTGGTAGGGAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTCCCTACCTCAAAGG
GTCAAGCACTTGCTGATGAGTACGGTATCAAATTTTTTGAGACTAGTGCAAAAACAAATCTTAATGTGGAAGAAGTTTTCTTTTCAATAGCAAGG
GACATTAAGCAAAGGCTTGCAGACACGGACTCTAAAGCGGAGGCTTCAACAATCAAAATTAATCAACCGGATCAGGCTGCTGGTGCTGGTCAACT
TGCTCAAAAATCTGCTTGCTGCGGTTCTTGAACTGGAAGAATACTAATGAGCACTTACATCAGGTGCTCAATGACAGGAGAGAACAAAAACAAAA
ACTAATTGTGACGAAACATTGTCGGTGGATGTAATTTAATTAATTGTCATTCTTTAAAAGGACTTATTTTAGTTTGTGTAAGATTGGCTCTTACT
GATCGAGAAACTTGCACTTATNGTGGCCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E674669] | SGN-U616706 | Coffea canephora | Build 3 | 5 ESTs assembled | |
| [SGN-E674669] | SGN-U631857 | Coffee species | Build 1 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T487200 [Download] [View] | Facility Assigned ID: cccs46w27l19.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
