EST details — SGN-E677984
| Search information |
| Request: 677984 | Match: SGN-E677984 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C428679 | Clone name: cccwc22w3i12 |
| ||
| Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E677984 | Length: 905 bp (1311 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E677984 [] (trimmed)
GCTCAAGTCCGCGGACTCTCTTGCCCGACCACCGGTGCCGGTGCTTGCTTATTCAACCAGTCCTACGGCGGAGATTCGTCGTTTTCCGCTACGCT
GTCGCATGATTCTCTGACGTTTGGGCCCGATGTGGTTCCGAATTATGCTTTCGGATGCATAACTGCAGTCTCCGGTGGGTCAATACCGCCCCAAG
GTCTGTTGGGTTTGGGCCGAGGCTCCTTGTCCTTGCTCTCTCAATCCGGCTCACTATACTCCGGGGTGTTCTCGTACTGCTTGCCCAGCTTCCGG
TCATACTACTTTTCTGGATCACTCAAACTTGGGCCGGTGGGCCAGCCCAAGAGCATCAGAACCACCCCGCTCCTCAAGAACCCGCGCCGGTCCTC
CTTGTACTATGTCAACCTGACGGGTATTACTGTGGGTAAGGTCCGGATACCCATTGCTCCGGAGCTCCTGGCATTCGACCCAGCCACAGGAGCGG
GTACCATAATTGACTCGGGCACGGTTATAACCCGATTCATCCTACCCATTTATACCGCATTGAGGGATGAGTTTAGGAACCAGGTGAAAGGCCCA
TTTAGTTCCTTGGGTGCATTTGATACGTGTTTTGCGGCTACAAATGAAGACGTAGCGCCCCCTGTTACGTTCCATTTTCAGGGATTGGATTTGGT
TTTGCCGCTGGAGAATAGTTTGATACACAGCAGTTCAGGTTCCTTGGCTTGTTTGGCAATGGCAGCCGCTCCAAATAATGTGAATTCCGTATTGA
ATGTCATTGCCAATTTGCAGCAGCAGAATCTTCGGATTTTGTTTGACACAGCCAACTCTCGCCTGGGAATTGCTCGTGAACTCTGTAATTAATTA
GTAGACCCTAGTCTTCTCAGCATTGGCAGCCCGGTGGTGATTTTAGACTC
GTCGCATGATTCTCTGACGTTTGGGCCCGATGTGGTTCCGAATTATGCTTTCGGATGCATAACTGCAGTCTCCGGTGGGTCAATACCGCCCCAAG
GTCTGTTGGGTTTGGGCCGAGGCTCCTTGTCCTTGCTCTCTCAATCCGGCTCACTATACTCCGGGGTGTTCTCGTACTGCTTGCCCAGCTTCCGG
TCATACTACTTTTCTGGATCACTCAAACTTGGGCCGGTGGGCCAGCCCAAGAGCATCAGAACCACCCCGCTCCTCAAGAACCCGCGCCGGTCCTC
CTTGTACTATGTCAACCTGACGGGTATTACTGTGGGTAAGGTCCGGATACCCATTGCTCCGGAGCTCCTGGCATTCGACCCAGCCACAGGAGCGG
GTACCATAATTGACTCGGGCACGGTTATAACCCGATTCATCCTACCCATTTATACCGCATTGAGGGATGAGTTTAGGAACCAGGTGAAAGGCCCA
TTTAGTTCCTTGGGTGCATTTGATACGTGTTTTGCGGCTACAAATGAAGACGTAGCGCCCCCTGTTACGTTCCATTTTCAGGGATTGGATTTGGT
TTTGCCGCTGGAGAATAGTTTGATACACAGCAGTTCAGGTTCCTTGGCTTGTTTGGCAATGGCAGCCGCTCCAAATAATGTGAATTCCGTATTGA
ATGTCATTGCCAATTTGCAGCAGCAGAATCTTCGGATTTTGTTTGACACAGCCAACTCTCGCCTGGGAATTGCTCGTGAACTCTGTAATTAATTA
GTAGACCCTAGTCTTCTCAGCATTGGCAGCCCGGTGGTGATTTTAGACTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E677984] | SGN-U619972 | Coffea canephora | Build 3 | 7 ESTs assembled | |
| [SGN-E677984] | SGN-U633819 | Coffee species | Build 1 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T452542 [Download] [View] | Facility Assigned ID: cccwc22w3i12.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
