EST details — SGN-E678076
| Search information |
| Request: 678076 | Match: SGN-E678076 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C428771 | Clone name: cccwc22w13c3 |
| ||
| Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E678076 | Length: 907 bp (1253 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E678076 [] (trimmed)
GCCTTGATATTTCGGAAAAGCTTGCAATGCCAGAATTAGATAGCATTTTAAAAGAGGCAGGAGCTCTTCATTCTCAAGATCATGGAAAACCACCA
AATGCTGCAAAGCAACTCAAACAGACTGTCAGTGACATAAAACATGACGTGCAGTCCCAACTCCAACAATGCCGTCAGACTGGCTTTAGAGTAAG
GAAGATTGCTAAGAAAGTGAAGAAGCTCCACATTAGTGGCCTTAACAATGCCATCAACTCTGCAACTGTTGTTGCTGTCCTGATTGCAACCGTTG
CTTTTGCAGCCATCTTCACTGTGCCCGGCCAGTATGTCGAGGAACAAACACCAGGATCTTCACTTGGGCAAGCCCATATAGCTAAAAATGCAGCT
TTCTTAGTCTTCATTTTGTGCGATAGTCTGGCCTTATTTATCTCCCTTGCTGTTGTGGTGGTACAGACATCTATTGTTGTGATAGAACAGAGGGC
AAAGAAGCAACTTATGTTCGTGATAAACAAGCTTATGTGGACGGCATGCCTCTTCATTTCAATTGCCTTTATTTCTCTCACCTATGTGGTTGTTG
GACGTCATGAACAGTGGCTTGCTGTGTATGCAACCATAATTGGTGGTACTATAATGCTTGCTACAATTGGCTCAATGTGCTTTTGTGTGGTCCGG
CATAGGTTGGAAGACTCAAAGATGAGGAACATAAGGAGAGCCGAGACACTATCAGGTTCCTTTTCAGTGTCAATGGTATCAGATCCGGAGTTATA
TGGTGAAAAGTATAAAAGGATGTATGCAGTGTAGGGACAGTCAGTTCCTGTGAGCGTGGGCATCTGGAGCAGAAAGATACCTTCAATGACTTCTG
CACTAGTATCAATATCCTGCAATATTAGCTGGATCATATTGTGTTGAGCTGC
AATGCTGCAAAGCAACTCAAACAGACTGTCAGTGACATAAAACATGACGTGCAGTCCCAACTCCAACAATGCCGTCAGACTGGCTTTAGAGTAAG
GAAGATTGCTAAGAAAGTGAAGAAGCTCCACATTAGTGGCCTTAACAATGCCATCAACTCTGCAACTGTTGTTGCTGTCCTGATTGCAACCGTTG
CTTTTGCAGCCATCTTCACTGTGCCCGGCCAGTATGTCGAGGAACAAACACCAGGATCTTCACTTGGGCAAGCCCATATAGCTAAAAATGCAGCT
TTCTTAGTCTTCATTTTGTGCGATAGTCTGGCCTTATTTATCTCCCTTGCTGTTGTGGTGGTACAGACATCTATTGTTGTGATAGAACAGAGGGC
AAAGAAGCAACTTATGTTCGTGATAAACAAGCTTATGTGGACGGCATGCCTCTTCATTTCAATTGCCTTTATTTCTCTCACCTATGTGGTTGTTG
GACGTCATGAACAGTGGCTTGCTGTGTATGCAACCATAATTGGTGGTACTATAATGCTTGCTACAATTGGCTCAATGTGCTTTTGTGTGGTCCGG
CATAGGTTGGAAGACTCAAAGATGAGGAACATAAGGAGAGCCGAGACACTATCAGGTTCCTTTTCAGTGTCAATGGTATCAGATCCGGAGTTATA
TGGTGAAAAGTATAAAAGGATGTATGCAGTGTAGGGACAGTCAGTTCCTGTGAGCGTGGGCATCTGGAGCAGAAAGATACCTTCAATGACTTCTG
CACTAGTATCAATATCCTGCAATATTAGCTGGATCATATTGTGTTGAGCTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E678076] | SGN-U613568 | Coffea canephora | Build 3 | 14 ESTs assembled | |
| [SGN-E678076] | SGN-U633008 | Coffee species | Build 1 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T452634 [Download] [View] | Facility Assigned ID: cccwc22w13c3.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
