EST details — SGN-E680482
Search information |
Request: 680482 | Match: SGN-E680482 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C431177 | Clone name: cccwc22w5l21 |
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Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E680482 | Length: 677 bp (1272 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E680482 [] (trimmed)
GGAACACTCATCTATTCCTGCTACCGTAAAGAAACTTTTCAACTTAAAATCAAACTTCTTGACTAAAAGGGATGCATGGGCTGGAACTTTTGAAA
ATGCCTTCAAGCTCCGTGAGACTCCACGTGATGATTGTCCAGAGAAACTCCCAGAGGTAAAGCAGAGTTTGAGGCCACGGGGTCCAAGGGAAGAT
GTTGAACTCTCTGAATTTCAACTCGAGTTGATCCAGCTTGCATCACAGCTCAATGGAGATCATGTACTGAACGCATACCCGGATATTGGAAAAGG
CATGACCGTTGGTGAAGCAAATAGGTACGCCGAGGATGCAGTTGAGAGGTTCCTGGAAGCTGGAAGGGCTGCTCTGAGAGCTGGCGCAAATGAAT
CGGCCATTGTCATCATGAAGCCGTCCCTCACCACCAGAACTGCCGCTGTAGACGCTCGTTACCTGGAAACTTTCTAATTGGCCCTGTGCTGTCTA
TACATATTTGAATTGATGTATCATATGTATATATTAAGTATTACATTCGGAATTCGTCACGCACGGCAAATTCACCCTATTAAGCAAATCGCGCC
GTTTAATATTGCAATACACTGTATACCTATAGGAATCTCAGGACTTGCAATTGAACGAGTGATTGTTGCGTAGCGCAAATAGTTGCTGAAATAAA
TCATTCCACTTT
ATGCCTTCAAGCTCCGTGAGACTCCACGTGATGATTGTCCAGAGAAACTCCCAGAGGTAAAGCAGAGTTTGAGGCCACGGGGTCCAAGGGAAGAT
GTTGAACTCTCTGAATTTCAACTCGAGTTGATCCAGCTTGCATCACAGCTCAATGGAGATCATGTACTGAACGCATACCCGGATATTGGAAAAGG
CATGACCGTTGGTGAAGCAAATAGGTACGCCGAGGATGCAGTTGAGAGGTTCCTGGAAGCTGGAAGGGCTGCTCTGAGAGCTGGCGCAAATGAAT
CGGCCATTGTCATCATGAAGCCGTCCCTCACCACCAGAACTGCCGCTGTAGACGCTCGTTACCTGGAAACTTTCTAATTGGCCCTGTGCTGTCTA
TACATATTTGAATTGATGTATCATATGTATATATTAAGTATTACATTCGGAATTCGTCACGCACGGCAAATTCACCCTATTAAGCAAATCGCGCC
GTTTAATATTGCAATACACTGTATACCTATAGGAATCTCAGGACTTGCAATTGAACGAGTGATTGTTGCGTAGCGCAAATAGTTGCTGAAATAAA
TCATTCCACTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E680482] | SGN-U617300 | Coffea canephora | Build 3 | 14 ESTs assembled | |
[SGN-E680482] | SGN-U637583 | Coffee species | Build 1 | 23 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T455040 [Download] [View] | Facility Assigned ID: cccwc22w5l21.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |