EST details — SGN-E684089
Search information |
Request: 684089 | Match: SGN-E684089 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C434780 | Clone name: cccwc22w30l20 |
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Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E684089 | Length: 927 bp (1174 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E684089 [] (trimmed)
GAAATGGCTTCCAACGTATTACCGTCCACAGTCAATCCCCCGCCGGAAAATTATATCCACAACCCAGCAGCCATCTTTCCACTGCTACAGATACC
TCAGGTTGACCTTTGCGTCCTCAATAGTGAACCATCATCACCTGAAGCCACTCAGGAGCTCAAGATTCTCCGGTTTTCTTTGACCGTGTGCGGTT
TCTTTCAGCACAAATATTCACGACCAGCTGGTGATCTTGATCTTGCTGGTTTTGGAAATGATCAAACTCTCACTCAACATCAGACCCTTGACTGG
AATGACGTGTTGTATCTCGACTTGTATCCTGAAGATCAAAGGACACTAAAATTATGGCCTGACAATCCTAACGACTTCAGGAAAGTTTTGCTCGA
GTGTAGGGCGAAGTTACAAAAATTAAATGAGCTCATCCTCAAGGCCATGGCAAATTCGCTCAACTTGGAAGACAATACCTTTCTGAAGCAATATG
GAGAAAGCCCAAGGGTGCTATCAAGATTTAACTCTCATCATCCGTGTTCAGGATCAGGACCCCAAGTTGAAGCCAAACCGCATTCGGATGCATCG
ACATTGACTTTTTTCTTACAAGACAAACCAGTGGAAGCCCTTCAAGTCCTAAGAGGTGATAAATGGTTCAGACTTCCTGCCATTGCTCATCCTGC
TATACTTGTTATGCCTGGGGACCAAGCTGAGATAATGACTAATGGCCTATTCAAGAGCCTGTTGCATAGGTTTGTGGCAAACTCAGAAAGAGAGA
GGATCAGCATATCCATTTTCTTTATCCCTGATAAGGAAAATGTGATTGAACCAGCAGAAGGACTTGTTGATGAAAAAAGGCCAAGTTTATATAGA
CCAGTTGTAGATTATGTTGGTGCATTTTGCCCTGAGCATCGTGAAAGGAACAGAGTGATTGATGCGCTGAAA
TCAGGTTGACCTTTGCGTCCTCAATAGTGAACCATCATCACCTGAAGCCACTCAGGAGCTCAAGATTCTCCGGTTTTCTTTGACCGTGTGCGGTT
TCTTTCAGCACAAATATTCACGACCAGCTGGTGATCTTGATCTTGCTGGTTTTGGAAATGATCAAACTCTCACTCAACATCAGACCCTTGACTGG
AATGACGTGTTGTATCTCGACTTGTATCCTGAAGATCAAAGGACACTAAAATTATGGCCTGACAATCCTAACGACTTCAGGAAAGTTTTGCTCGA
GTGTAGGGCGAAGTTACAAAAATTAAATGAGCTCATCCTCAAGGCCATGGCAAATTCGCTCAACTTGGAAGACAATACCTTTCTGAAGCAATATG
GAGAAAGCCCAAGGGTGCTATCAAGATTTAACTCTCATCATCCGTGTTCAGGATCAGGACCCCAAGTTGAAGCCAAACCGCATTCGGATGCATCG
ACATTGACTTTTTTCTTACAAGACAAACCAGTGGAAGCCCTTCAAGTCCTAAGAGGTGATAAATGGTTCAGACTTCCTGCCATTGCTCATCCTGC
TATACTTGTTATGCCTGGGGACCAAGCTGAGATAATGACTAATGGCCTATTCAAGAGCCTGTTGCATAGGTTTGTGGCAAACTCAGAAAGAGAGA
GGATCAGCATATCCATTTTCTTTATCCCTGATAAGGAAAATGTGATTGAACCAGCAGAAGGACTTGTTGATGAAAAAAGGCCAAGTTTATATAGA
CCAGTTGTAGATTATGTTGGTGCATTTTGCCCTGAGCATCGTGAAAGGAACAGAGTGATTGATGCGCTGAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E684089] | SGN-U618467 | Coffea canephora | Build 3 | 5 ESTs assembled | |
[SGN-E684089] | SGN-U633998 | Coffee species | Build 1 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T458643 [Download] [View] | Facility Assigned ID: cccwc22w30l20.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |