EST details — SGN-E684347
Search information |
Request: 684347 | Match: SGN-E684347 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C435038 | Clone name: cccwc22w26j10 |
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Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E684347 | Length: 975 bp (1403 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E684347 [] (trimmed)
GGAGAAAGCAGCTGAAGAACTTGCAAACAAACTGGTAATAAAGGGTCTGAGGTTGAAGCTGCTTTGGGGGAGACCACAAGCACCAAAACCAGAAT
CTGAAATCTCTGATGAAGCAAGACAGCAGGCGGCAGTGGCTCATAGTGGTTTGTTGCCTAGGGCTGTTATATCACAGCAGCAGAACCAGCCTCTT
CAGCCACCAGGCACACATGACCAACCCCCAGCTATGCCCTACTTTAATATTCCTCCACAGCCTCAGCAGGAGAGGGCATTTTATCCCTCGATGGA
TCCTCAAAGAATGGGTGCTCTTGTACCAGCCCAAGATGGAGCTTCAAGTGGACCATCAGGGAGTGGTGATAACAGAAGTGGTCCGGAGAAGCAGC
ATCAGGGGCAGCATTATGCTTACCCTGGTGGACCACCACCTCCTCAAGGTCAATTCTATCAGCAATATTATCCCCCTTACGGGTATATGCCACCT
CCACCTCCTCCTTATCAGCAATACCCCCCCTATCCGGCTTCAATGGTTCCACCACCTCCCAGTAATGCGACAAATCATCAACACCCCCCTCCTTA
TCAGTCCAGAGTGCCTCCACCTCCCACCGGCACAGACCACCAATCAGCTTATCAGCACAGAGCACCACCTGGGTCCAATCAACAGCATCATCCTC
CTTATCAGTCTGGAGTGCCGACACCATCACCCAGTGCTCCACCGCCAGCTACCGGTGAGCAACATCATGCTAGAGTTCCTTCCGCTAGTGGTGAA
CAAGCAGGGACAAGTCAGCAGATGCCATCATCGGAGACGGATCAGCAATCATAACCTGTTTTGCTTCGTTATCTTTTGTGTGCTGATAATGTGTA
TTAATGATTGAGAATTGCGGCTGCTAAAGATTATACACACGCAGTTAGTTTCAATAAAGCTGTTGTTTGCGTGAAGAATATTCAAATTTTTCAAA
TTTTGCTCAAATTGTTGGTAAAAAA
CTGAAATCTCTGATGAAGCAAGACAGCAGGCGGCAGTGGCTCATAGTGGTTTGTTGCCTAGGGCTGTTATATCACAGCAGCAGAACCAGCCTCTT
CAGCCACCAGGCACACATGACCAACCCCCAGCTATGCCCTACTTTAATATTCCTCCACAGCCTCAGCAGGAGAGGGCATTTTATCCCTCGATGGA
TCCTCAAAGAATGGGTGCTCTTGTACCAGCCCAAGATGGAGCTTCAAGTGGACCATCAGGGAGTGGTGATAACAGAAGTGGTCCGGAGAAGCAGC
ATCAGGGGCAGCATTATGCTTACCCTGGTGGACCACCACCTCCTCAAGGTCAATTCTATCAGCAATATTATCCCCCTTACGGGTATATGCCACCT
CCACCTCCTCCTTATCAGCAATACCCCCCCTATCCGGCTTCAATGGTTCCACCACCTCCCAGTAATGCGACAAATCATCAACACCCCCCTCCTTA
TCAGTCCAGAGTGCCTCCACCTCCCACCGGCACAGACCACCAATCAGCTTATCAGCACAGAGCACCACCTGGGTCCAATCAACAGCATCATCCTC
CTTATCAGTCTGGAGTGCCGACACCATCACCCAGTGCTCCACCGCCAGCTACCGGTGAGCAACATCATGCTAGAGTTCCTTCCGCTAGTGGTGAA
CAAGCAGGGACAAGTCAGCAGATGCCATCATCGGAGACGGATCAGCAATCATAACCTGTTTTGCTTCGTTATCTTTTGTGTGCTGATAATGTGTA
TTAATGATTGAGAATTGCGGCTGCTAAAGATTATACACACGCAGTTAGTTTCAATAAAGCTGTTGTTTGCGTGAAGAATATTCAAATTTTTCAAA
TTTTGCTCAAATTGTTGGTAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E684347] | SGN-U618086 | Coffea canephora | Build 3 | 3 ESTs assembled | |
[SGN-E684347] | SGN-U629452 | Coffee species | Build 1 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T458901 [Download] [View] | Facility Assigned ID: cccwc22w26j10.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |