EST details — SGN-E684381
Search information |
Request: 684381 | Match: SGN-E684381 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C435072 | Clone name: cccwc22w25f16 |
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Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E684381 | Length: 904 bp (1274 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E684381 [] (trimmed)
TCATCTAAGGCTAGGAACGAAGAAGAGGAGGTGGAGGAAGAGAGTCATGGCGGAGACAGGGGACGAAAATGCAGGGGAGTTTTACTTGAGGTACT
ATGTCGGCCACAAGGGTAAATTCGGGCATGAGTTCTTGGAGTTCGAGTTTAGGCCCGACGGCAAGCTGCGGTATGCTAATAATTCCAACTATAAG
AACGACACCATGATCCGTAAAGAGGTCTTCGTCACCCCCGCCGTTCTAAAAGAATGCCGTCGCATCGTCGTTGAAAGCGAGATAATGAAGGAAGA
TGACAACAATTGGCCAGAACCAGATCGCGTTGGAAGGCAAGAGCTGGAGATTGTAATGGGGAACGAGCACATATCTTTTACCACTGCTAAGATTG
GTTCTCTCGTGGATGTTAATATCAGTAAAGATCCTGAAGGTCTTCGAATCTTCTATTATCTTGTTCAGGATTTGAAGTGTTTCGTGTTTTCTCTT
ATCTCACTCCACTTCAAGATCAAACCCATTTGAGTGTCAGCCATATCACCCCCTGGAACAGAAGGAAAGCCATGTGTTTTGAAGTTGCTTGGTCT
GTTGTCCTTTGCCTTGATAAGTTCGTTATATATTTAAACTTATAAATAGCGTTGATTTGGGTGATTGTTCAAGTAGATGAAGTTTGTGATATGCT
AGTTGTGTAATTGAATATCTATTCCTTTTGCTCTTGATAAGCCCTCTTTTCCGCATTAATCAGTGGATCTTCAGGCTTGAGCCTAGGTTGACTCG
CATCTGATCAGCTCCTCCTTCCTGTTTCTAATTTAAGACGTGATTATTGCATCTTGGAGGTGGTGTAGGTATTGTGTTAGTTTTAAAGGGTGAAT
TGTGTAACGCAAAACAAATCTAGTGATGAGATATTTGTCTTTTCTTAAA
ATGTCGGCCACAAGGGTAAATTCGGGCATGAGTTCTTGGAGTTCGAGTTTAGGCCCGACGGCAAGCTGCGGTATGCTAATAATTCCAACTATAAG
AACGACACCATGATCCGTAAAGAGGTCTTCGTCACCCCCGCCGTTCTAAAAGAATGCCGTCGCATCGTCGTTGAAAGCGAGATAATGAAGGAAGA
TGACAACAATTGGCCAGAACCAGATCGCGTTGGAAGGCAAGAGCTGGAGATTGTAATGGGGAACGAGCACATATCTTTTACCACTGCTAAGATTG
GTTCTCTCGTGGATGTTAATATCAGTAAAGATCCTGAAGGTCTTCGAATCTTCTATTATCTTGTTCAGGATTTGAAGTGTTTCGTGTTTTCTCTT
ATCTCACTCCACTTCAAGATCAAACCCATTTGAGTGTCAGCCATATCACCCCCTGGAACAGAAGGAAAGCCATGTGTTTTGAAGTTGCTTGGTCT
GTTGTCCTTTGCCTTGATAAGTTCGTTATATATTTAAACTTATAAATAGCGTTGATTTGGGTGATTGTTCAAGTAGATGAAGTTTGTGATATGCT
AGTTGTGTAATTGAATATCTATTCCTTTTGCTCTTGATAAGCCCTCTTTTCCGCATTAATCAGTGGATCTTCAGGCTTGAGCCTAGGTTGACTCG
CATCTGATCAGCTCCTCCTTCCTGTTTCTAATTTAAGACGTGATTATTGCATCTTGGAGGTGGTGTAGGTATTGTGTTAGTTTTAAAGGGTGAAT
TGTGTAACGCAAAACAAATCTAGTGATGAGATATTTGTCTTTTCTTAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E684381] | SGN-U617164 | Coffea canephora | Build 3 | 21 ESTs assembled | |
[SGN-E684381] | SGN-U638373 | Coffee species | Build 1 | 36 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T458935 [Download] [View] | Facility Assigned ID: cccwc22w25f16.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |