EST details — SGN-E685840
| Search information |
| Request: 685840 | Match: SGN-E685840 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C436531 | Clone name: cccwc22w31c18 |
| ||
| Library Name: cccwc22w | Organism: Coffea canephora |
Tissue: Whole Cherry
Development Stage: 22 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E685840 | Length: 976 bp (1269 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E685840 [] (trimmed)
GAAGTAGTTGAAAATATTAGTGGCCTCAGAATACAAGATGAGTCGGTGAATGACCATGATTCTGGTCAGGCCAGTGGCATACTATGGAATGATAA
GTTGCCTCGTACCACTGCTTCATCAAAGGAAGAAAGAAAAGGATCGCTGTCTTTCAGTGTAATTGATACATCTTCCAGCGATAAAGTGAACCAAC
ATGTTAGCCAAAGTGAAGATGAAAATGCAGTAAGTTCAGCTAAGGCTTCACAGGGACAGAAGACTGCTACAAGGAAGCCTGCACAGCGGAATAAG
GTTCCATTTGAGAAGGGTTATAGCCAGATGGATTGGATGAGACTCACTAGAATGCATCCTGATCTGGCAGGGTTAAATGGACAATCCAACAGGAG
ACTTGTTTCGTTGAATGAAGTCAAACAACACCAAAATGAGGACTCCATGTGGACAGTTCTTAAAGGTCATGTCTACAACATAGCTCCATACATGA
AATTTCACCCAGGAGGTGTTGATATGCTGGTGAAAGCAGTTGGCAAGGATTGCACATCTTTGTTCAATAAATACCATCCTTGGGTTAATGCTGAA
TTTTTACTGGAAAAGTGTCTTGTGGGCACTTTACAGGATGGCCATTGAACAACCATTTATTTGCAAGATTCAAGAAATTGTTCTCAGGAAAAGTG
CTTTATGACAAGCATATTTGCCTTAGAGAATAAGACACATTACATCTTCCTACGTGAATGTACAATTTGAAGACTGACGTTGATAATGTCAGATG
GGTAAGGAAATAATTTACGAGTGGATGCTAGAATACTTGTGTGCAGGATAACATTTCTGACAGCAAGGGGTTATGTATTTGATTTTTTTACTGCC
AATTGCTATGAATTATTCTTGGCCTTTTAGCTTTTCTCATCCCTTTACTGCTGTAACTGTAATTGCTCACTGATCTGTCTCACATTGGTTTGTCA
ATCTTTGGAACACTGCATTAATCTTC
GTTGCCTCGTACCACTGCTTCATCAAAGGAAGAAAGAAAAGGATCGCTGTCTTTCAGTGTAATTGATACATCTTCCAGCGATAAAGTGAACCAAC
ATGTTAGCCAAAGTGAAGATGAAAATGCAGTAAGTTCAGCTAAGGCTTCACAGGGACAGAAGACTGCTACAAGGAAGCCTGCACAGCGGAATAAG
GTTCCATTTGAGAAGGGTTATAGCCAGATGGATTGGATGAGACTCACTAGAATGCATCCTGATCTGGCAGGGTTAAATGGACAATCCAACAGGAG
ACTTGTTTCGTTGAATGAAGTCAAACAACACCAAAATGAGGACTCCATGTGGACAGTTCTTAAAGGTCATGTCTACAACATAGCTCCATACATGA
AATTTCACCCAGGAGGTGTTGATATGCTGGTGAAAGCAGTTGGCAAGGATTGCACATCTTTGTTCAATAAATACCATCCTTGGGTTAATGCTGAA
TTTTTACTGGAAAAGTGTCTTGTGGGCACTTTACAGGATGGCCATTGAACAACCATTTATTTGCAAGATTCAAGAAATTGTTCTCAGGAAAAGTG
CTTTATGACAAGCATATTTGCCTTAGAGAATAAGACACATTACATCTTCCTACGTGAATGTACAATTTGAAGACTGACGTTGATAATGTCAGATG
GGTAAGGAAATAATTTACGAGTGGATGCTAGAATACTTGTGTGCAGGATAACATTTCTGACAGCAAGGGGTTATGTATTTGATTTTTTTACTGCC
AATTGCTATGAATTATTCTTGGCCTTTTAGCTTTTCTCATCCCTTTACTGCTGTAACTGTAATTGCTCACTGATCTGTCTCACATTGGTTTGTCA
ATCTTTGGAACACTGCATTAATCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E685840] | SGN-U613634 | Coffea canephora | Build 3 | 12 ESTs assembled | |
| [SGN-E685840] | SGN-U638337 | Coffee species | Build 1 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T460394 [Download] [View] | Facility Assigned ID: cccwc22w31c18.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
