EST details — SGN-E686854
Search information |
Request: 686854 | Match: SGN-E686854 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C464236 | Clone name: cccs46w31a18 |
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Library Name: cccs46w | Organism: Coffea canephora |
Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E686854 | Length: 919 bp (1244 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E686854 [] (trimmed)
GGACATTTAAGACAATGACAACTTTCATGCCTCCACCTCCTGCAGCTACTTTCTTAGCATTTCATCCTCAAGATAACAACATTATTGCTATTGGC
ATGGATGACTCAACTATTCAGATATACAACGTTCGTGTAGATGAGGTGAAAAGCAAGCTAAAAGGCCATTCTAAAAGAATTACTGGCCTTGCTTT
CTCCCATGTACTAAATGTGTTAGTCTCATCAGGAGCAGATGCGCAGCTATGTGTGTGGAACTCGGATGGATGGGAAAAGCAAAAGGCTAGATTTT
TGCAAATTCCTTCAGGCAGGACACCTATGGCACAATCGGACGCTCGTGTGCAGTTCCATCAGGATCAGATTCACTTCCTGGTTGTCCACGAGACT
CAGCTTGCCATATATGAGACAACAAAACTGGAATGTGTCAAGCAGTGGCTTCCGCGTGAATCTGGTGCTCCAATTTCTCATGCAACATTCTCTTG
CGATAGCCAGCTGGTGTATGCCAGCTTCTTAGATGCTGCAGTGTGCGTGTTCACAGCAACTCACTTACAAATGAGATGTCGTATAAGTCCTCCTG
CTTATCTTCCCAACAGTATAAGCAACTCCAATGTCCAGCCACTTGTAATTGCTGCACATCCACAGGATCCAAACCAGTTTGCTATAGGTTTATCA
GATGGTGCGGTCCATGTTTTTGAGCCCCTTGAATCTGATGGCAGATGGGGTGTCCCTCCACTGGTCGATAATGGATCTGCAAGCAGTTTACCAGC
GAGTGCAGCTGGAGGCTTCAGCTCTGATCAGGCGCAGAGATGACTGGATAGACGGGGAAATGCCAATTTTACCTGGTTTTGTTTCTTGGCAAGCT
CCATTCTGTTGCACAAGAAGTAGAAAAATTTGAATCCCTTAAATGGTTGATTTCAACTATTACT
ATGGATGACTCAACTATTCAGATATACAACGTTCGTGTAGATGAGGTGAAAAGCAAGCTAAAAGGCCATTCTAAAAGAATTACTGGCCTTGCTTT
CTCCCATGTACTAAATGTGTTAGTCTCATCAGGAGCAGATGCGCAGCTATGTGTGTGGAACTCGGATGGATGGGAAAAGCAAAAGGCTAGATTTT
TGCAAATTCCTTCAGGCAGGACACCTATGGCACAATCGGACGCTCGTGTGCAGTTCCATCAGGATCAGATTCACTTCCTGGTTGTCCACGAGACT
CAGCTTGCCATATATGAGACAACAAAACTGGAATGTGTCAAGCAGTGGCTTCCGCGTGAATCTGGTGCTCCAATTTCTCATGCAACATTCTCTTG
CGATAGCCAGCTGGTGTATGCCAGCTTCTTAGATGCTGCAGTGTGCGTGTTCACAGCAACTCACTTACAAATGAGATGTCGTATAAGTCCTCCTG
CTTATCTTCCCAACAGTATAAGCAACTCCAATGTCCAGCCACTTGTAATTGCTGCACATCCACAGGATCCAAACCAGTTTGCTATAGGTTTATCA
GATGGTGCGGTCCATGTTTTTGAGCCCCTTGAATCTGATGGCAGATGGGGTGTCCCTCCACTGGTCGATAATGGATCTGCAAGCAGTTTACCAGC
GAGTGCAGCTGGAGGCTTCAGCTCTGATCAGGCGCAGAGATGACTGGATAGACGGGGAAATGCCAATTTTACCTGGTTTTGTTTCTTGGCAAGCT
CCATTCTGTTGCACAAGAAGTAGAAAAATTTGAATCCCTTAAATGGTTGATTTCAACTATTACT
Unigenes |
Current Unigene builds | |||||
[SGN-E686854] | SGN-U613441 | Coffea canephora | Build 3 | 9 ESTs assembled | |
[SGN-E686854] | SGN-U631667 | Coffee species | Build 1 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T488099 [Download] [View] | Facility Assigned ID: cccs46w31a18.i |
Submitter: None | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |