EST details — SGN-E688395
Search information |
Request: 688395 | Match: SGN-E688395 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C465401 | Clone name: t3_tus_50_f02 |
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Library Name: t3_tus | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E688395 | Length: 646 bp (772 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E688395 [] (trimmed)
AGCAAGCTCTGGATATTTGTCATACTCAAGCGGCATCGGCAATTGAAGGAAGTCCGAGCCAAGAGACAATCAGATTAAAGGAAATGATGAAGAAA
GGTCAAGTTAGTCTTAGCATAAAAGAGCGTCTTGATGCTAGTAACAGTTTGGGGCCAGAGAATGTGTGTTCTCATATTGAAAAAACATTTCTTGG
TGAAGTTGGTAATGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTTCCAGATGCAATGGAGATGATATTTCAATCTGCCCTGG
CTTTGGGTAGAAAGGGAGCTGTTGATGAGTACATGAGTCGGACTGAAAATGCAGTCATATTTTATTCAAAAGCTGTGCGGTTGTTAGCATTCCTT
CAAGTGGAAGCACCATCTCTGATTTTAAACCCTCCACTTTCTCTAACAAACTCGGATCGTTATAGGCTTCAAAATTACATTGATGTCCTTAATAA
CAGGCAAAGCATTTCAAAGTCTCAAATGATGGCTCTGCTCAAGTGTGAAGATCAACACTGCTCTCCATAAGGAGGAGAGAGAGCTGTTAACACAA
AGTGATGATAGCATACATCAGTGTCTTACTCTGTNAAATTCTTTTGTCTGTACAGTTATTCTTTTAGCAATATTTT
GGTCAAGTTAGTCTTAGCATAAAAGAGCGTCTTGATGCTAGTAACAGTTTGGGGCCAGAGAATGTGTGTTCTCATATTGAAAAAACATTTCTTGG
TGAAGTTGGTAATGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTTCCAGATGCAATGGAGATGATATTTCAATCTGCCCTGG
CTTTGGGTAGAAAGGGAGCTGTTGATGAGTACATGAGTCGGACTGAAAATGCAGTCATATTTTATTCAAAAGCTGTGCGGTTGTTAGCATTCCTT
CAAGTGGAAGCACCATCTCTGATTTTAAACCCTCCACTTTCTCTAACAAACTCGGATCGTTATAGGCTTCAAAATTACATTGATGTCCTTAATAA
CAGGCAAAGCATTTCAAAGTCTCAAATGATGGCTCTGCTCAAGTGTGAAGATCAACACTGCTCTCCATAAGGAGGAGAGAGAGCTGTTAACACAA
AGTGATGATAGCATACATCAGTGTCTTACTCTGTNAAATTCTTTTGTCTGTACAGTTATTCTTTTAGCAATATTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E688395] | SGN-U570351 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T489420 [Download] [View] | Facility Assigned ID: t3_tus_50_f02 |
Submitter: None | Sequencing Facility: Giovanni |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |