EST details — SGN-E689869
| Search information |
| Request: 689869 | Match: SGN-E689869 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C466875 | Clone name: LH_Ea02A11 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C466875 [LH_Ea02A11] | Trace: SGN-T493680 | EST: SGN-E693709 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E689869 | Length: 738 bp (1062 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E689869 [] (trimmed)
CGTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATG
TATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAACCAGACCGTGTAATGGGGTTATGCCCTCATACG
GATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACTGAGGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCC
TGATGCCTTTGTTGTCAACATTGGAGACATTCTAGAGATTGTGACAAATGGAATTTACAAGAGCATTGAACATCGAGCCATCGTTAATGAGGATA
AGGAGAGGATCTCTATTGCTACATTTTTTAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAGTCTCCTCACTCCTCGATCCCCTGCAAAA
TATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTCTAAAAACTGGAAATGG
AGATCATCGGAGCAATTGATCAATGTTGCATTTTATTCCGCTTGTTTAATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATGAGCTATCTC
ATGTCATGTAAAAGGTTGCAGAAGAACAGTTATTGCTTATATTTATATTCAAAACCATTAAGAAAAAAAAAAA
TATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAACCAGACCGTGTAATGGGGTTATGCCCTCATACG
GATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACTGAGGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCC
TGATGCCTTTGTTGTCAACATTGGAGACATTCTAGAGATTGTGACAAATGGAATTTACAAGAGCATTGAACATCGAGCCATCGTTAATGAGGATA
AGGAGAGGATCTCTATTGCTACATTTTTTAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAGTCTCCTCACTCCTCGATCCCCTGCAAAA
TATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTCTAAAAACTGGAAATGG
AGATCATCGGAGCAATTGATCAATGTTGCATTTTATTCCGCTTGTTTAATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATGAGCTATCTC
ATGTCATGTAAAAGGTTGCAGAAGAACAGTTATTGCTTATATTTATATTCAAAACCATTAAGAAAAAAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E689869] | SGN-U586249 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T497600 [Download] [View] | Facility Assigned ID: LH_Ea02A11.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 12.5 |
Working
