EST details — SGN-E690582
Search information |
Request: 690582 | Match: SGN-E690582 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C467588 | Clone name: LH_Ea03O04 |
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Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C467588 [LH_Ea03O04] | Trace: SGN-T493074 | EST: SGN-E694422 | Direction: 3' | Facility: AGI |
Sequence |
Sequence Id: SGN-E690582 | Length: 594 bp (988 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E690582 [] (trimmed)
CGCTATAATCAAAGAGACATTTAGACTTCACCCTGTATGTGCATTGCTTGCTCCCCATTACTCGCTCGAGGATTGTAATGTTGCCGGTTATGACA
TAACAAAAGGGACAGCTGTTTTTGTAAGCGGATGGTCTTTAGGAAGAAATCCAAAGTATTGGGATAGGCCAGAAGAGTTTGTTCCCGAAAGATTC
ATAGGAAATAACATAGATATAAAAGGGCAAAATTTCGCGTTGTTGCCATTTGGTTCTGGAAGGAGAAGATGCCCGGGATATAGCCTTGGCTTGAA
GATTGTTCAAACAACAATGGCTAATTTGTTGCATGGATTCAATTGGAAATTAGGAGGAGATACGAAGCCAGAAGATATAAGCATGGAGGAGATTT
ATGGATTGACTATACACCCAAAAAATCCGATATCTTTGATCATGGAACCAAGACTTCCACTCCATCTTTATTAGGACTTCAATCTTGTTCTGTTT
AAGCTATATCTAGCATTAAATAAAATTGCATGTTTGACAAAGCAACACATTTTAAAATTGGTCTTCTTTCACTTAAAATCTGTTGCATGAATAAA
GTTATCCCTTTTGAAAAAAAAAAA
TAACAAAAGGGACAGCTGTTTTTGTAAGCGGATGGTCTTTAGGAAGAAATCCAAAGTATTGGGATAGGCCAGAAGAGTTTGTTCCCGAAAGATTC
ATAGGAAATAACATAGATATAAAAGGGCAAAATTTCGCGTTGTTGCCATTTGGTTCTGGAAGGAGAAGATGCCCGGGATATAGCCTTGGCTTGAA
GATTGTTCAAACAACAATGGCTAATTTGTTGCATGGATTCAATTGGAAATTAGGAGGAGATACGAAGCCAGAAGATATAAGCATGGAGGAGATTT
ATGGATTGACTATACACCCAAAAAATCCGATATCTTTGATCATGGAACCAAGACTTCCACTCCATCTTTATTAGGACTTCAATCTTGTTCTGTTT
AAGCTATATCTAGCATTAAATAAAATTGCATGTTTGACAAAGCAACACATTTTAAAATTGGTCTTCTTTCACTTAAAATCTGTTGCATGAATAAA
GTTATCCCTTTTGAAAAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E690582] | SGN-U570076 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T496644 [Download] [View] | Facility Assigned ID: LH_Ea03O04.f |
Submitter: Eyal Fridman | Sequencing Facility: AGI |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 12.5 |