EST details — SGN-E691193
| Search information |
| Request: 691193 | Match: SGN-E691193 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C468199 | Clone name: LH_Ea05H15 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C468199 [LH_Ea05H15] | Trace: SGN-T492389 | EST: SGN-E695033 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E691193 | Length: 860 bp (1149 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E691193 [] (trimmed)
CCGTTACAAGGAAAAAAAAATGGAAGTAGAGAAGGAGAAGTACCTGCTGAGTTAACAAGATGTTGAAGTTAGCTGTTTTCTTAAGCCTAATTTGG
GCTTTGACTCTTCTCTATGGAGAGATGTTTTCATTTTGGATCCCTTTTCTCTCATGTTCTTGGCCTCATCCTGCTACTTCTTCTTCAATGACAGA
TGGAGTAGATCATCAACGTGATTACGTGAAAATTGCTGTTCTGACTGATCCTCAGCTCATGGATAGAACCTCTCTTCATCTTGCCCCGAAATCCT
TTGCACTTGAAGTTGCTCAGTTCTATACAGATTTGTATATGCGCAGGGCATTCCTATCATCTATTTTACCTTCCAAACCAGATATAATTCTGTTC
CTAGGTGATTATTTCGACGGTGGGCCTTTTCTCTCTGATGAAGAATGGCAGGAATCCTGGAGTCGGTTTAAGCATATATTTGACATTGACATGCT
TGAACAAACTACGAACATAAAGCTGTACTACCTTGCTGGAAACCATGATATAGGGTATGCAGCTTTTCACTCGCGTATGCCGGAGGTTATCAAAC
GCTACGAGAAAGCATTTGGTGCAAGGAACTATCATTTTACAGCTGGGAAAGTAGATTTCATCACCATCGATGCGCAAACCTTAGATGGGCATCCC
CAGAACAATGTAACCCCTGCCACATGGGAATTTGTCAAGAATGTCTCTAACCATCTGTCTTCGAATCCAAGGGTTCTATTGACTCATATTCCATT
GTATCGACCAGATCAAACTGCCTGTGGTTCATACCGCTCATCGTCAATTATTAATCAGAGAATCCACCGTGCTGCTCAGGATAATGAAATATTAT
ATCAA
GCTTTGACTCTTCTCTATGGAGAGATGTTTTCATTTTGGATCCCTTTTCTCTCATGTTCTTGGCCTCATCCTGCTACTTCTTCTTCAATGACAGA
TGGAGTAGATCATCAACGTGATTACGTGAAAATTGCTGTTCTGACTGATCCTCAGCTCATGGATAGAACCTCTCTTCATCTTGCCCCGAAATCCT
TTGCACTTGAAGTTGCTCAGTTCTATACAGATTTGTATATGCGCAGGGCATTCCTATCATCTATTTTACCTTCCAAACCAGATATAATTCTGTTC
CTAGGTGATTATTTCGACGGTGGGCCTTTTCTCTCTGATGAAGAATGGCAGGAATCCTGGAGTCGGTTTAAGCATATATTTGACATTGACATGCT
TGAACAAACTACGAACATAAAGCTGTACTACCTTGCTGGAAACCATGATATAGGGTATGCAGCTTTTCACTCGCGTATGCCGGAGGTTATCAAAC
GCTACGAGAAAGCATTTGGTGCAAGGAACTATCATTTTACAGCTGGGAAAGTAGATTTCATCACCATCGATGCGCAAACCTTAGATGGGCATCCC
CAGAACAATGTAACCCCTGCCACATGGGAATTTGTCAAGAATGTCTCTAACCATCTGTCTTCGAATCCAAGGGTTCTATTGACTCATATTCCATT
GTATCGACCAGATCAAACTGCCTGTGGTTCATACCGCTCATCGTCAATTATTAATCAGAGAATCCACCGTGCTGCTCAGGATAATGAAATATTAT
ATCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E691193] | SGN-U581096 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T496235 [Download] [View] | Facility Assigned ID: LH_Ea05H15.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |
Working
