Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E691195

Search information 
Request: 691195Match: SGN-E691195
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C468201Clone name: LH_Ea05H17
nocartOrdering Not Available
Library Name: LH_EaOrganism: Solanum habrochaites (formerly Lycopersicon hirsutum)

Tissue: Glandular Trichomes
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C468201 [LH_Ea05H17] Trace: SGN-T492387 EST: SGN-E695035 Direction: 3' Facility: AGI
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E691195Length: 674 bp (1109 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E691195 [] (trimmed) CGGTACTTCTCTCTCTCTCTAAGGGTGACCTGAGACTTGTATCCTAATTTTCTAGATCACATACAAAAATGGTGAAGGCCGTCGCCGTCCTTAAC
AGCAGTGAAGGTGTTAGTGGCACCATCCTCTTCACTCAAGATGGAGATGCTCCAACCACAGTTAATGGAAATATTTCTGGCCTAAAACCTGGACT
TCATGGCTTCCATGTCCATGCCCTTGGTGATACCACAAATGGCTGCATGTCAACAGGACCACATTACAATCCTGCTGGTAAGGAGCATGGTGCTC
CTGAAGATGAGGTGCGTCATGCTGGTGATCTTGGTAACATCACAGTTGGAGAAGATGGTACTGCATCTTTTACTATTACCGACAAGCAGATTCCT
CTCACTGGTCCACAGTCCATCATTGGAAGAGCTGTCGTTGTTCATGCTGATCCTGATGATCTTGGAAAGGGAGGACATGAGCTCAGTAAAAGCAC
AGGAAATGCTGGCGGAAGGATTGCTTGTGGTATTATTGGCCTCCAGGGTTAATTGCTCCGGTGAGGTGAAGATTCAGCAACTAGCGGTGGTGACC
GTCTTAGAATAAAGTTAATATTGGAGCTGCTGAGCCTGTTTTCTATGTATTTATCATTTGACGCCTTTTGAATTGGGGTTGAACCATTCATAATA
AAAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E691195] SGN-U581590 Tomato 200607 Build 2 168 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T496233 [Download] [View] Facility Assigned ID: LH_Ea05H17.f
Submitter: Eyal Fridman Sequencing Facility: AGI
Funding Organization: NSF
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0007 Quality Trim Threshold: 12.5