EST details — SGN-E691234
| Search information |
| Request: 691234 | Match: SGN-E691234 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C468240 | Clone name: LH_Ea05J08 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C468240 [LH_Ea05J08] | Trace: SGN-T492348 | EST: SGN-E695074 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E691234 | Length: 795 bp (1185 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E691234 [] (trimmed)
CAAACTTCAAACGGTTTGTGATGAAGAACTCCACCGATGCGATGAAGGATTCACGGTTTTTCGACTTTGTTAATACGGTGAGTTCTCTTCAATAC
AGAAAATTGGATTTTGAAGAATTCTGTGCTGCTTCGATAAGTGTACATCAGCTTGAGGGAATGGAAAGCTGGGAGCAACATGCACGTCGTGGCTA
TGAATTCTTTGAAAAGGAGGGGAACAGACCTATTATGATAGAGGAACTTGCTTCGGAGCTCGGGCTGTCTCCTTCCGTACCAGTTCATGTAGTTC
TGCAGGACTGGATTAGACACTCAGATGGAAAGCTCAGTTTCTTGGGATTTGTCCGGCTTCTACATGGAGTTTCTTCGCGCACATTTCAAAAAGCT
TAAAGAGTATAACCTATCTTATTGAACTTCCCAGTGTTTCATCCAGCTTTCAGACTATTCATCACTCGAAGAATCAAAGTCTTGTTGCTTGATCA
AATGATCTGTTGAAAGGCGGAAACAGCTAGTTTACAAAAAAACTACAGATCCAGTTTGAAAATACATGACACTAGCAGCAGTATATTTGGTGTCA
AATCTTATTTTGTCATGTAATTCTTGTATTCTTCAAATGTTGGATCACATTCCACTTTAAGAGGATTGTACAGATGAGGATAATCAGAAGAAAAA
AAGTTGTAAGTAGTTTGTCAGAAAAGACAGCTGAAAGCTGAGATGAGTTCTTGTGGCTTCTTGGTGTAACCTGTTTACCATTTTGCTTTAGCATA
ATAAATTCTCTTTATTGTGTCTCTAAAAAAAAAAA
AGAAAATTGGATTTTGAAGAATTCTGTGCTGCTTCGATAAGTGTACATCAGCTTGAGGGAATGGAAAGCTGGGAGCAACATGCACGTCGTGGCTA
TGAATTCTTTGAAAAGGAGGGGAACAGACCTATTATGATAGAGGAACTTGCTTCGGAGCTCGGGCTGTCTCCTTCCGTACCAGTTCATGTAGTTC
TGCAGGACTGGATTAGACACTCAGATGGAAAGCTCAGTTTCTTGGGATTTGTCCGGCTTCTACATGGAGTTTCTTCGCGCACATTTCAAAAAGCT
TAAAGAGTATAACCTATCTTATTGAACTTCCCAGTGTTTCATCCAGCTTTCAGACTATTCATCACTCGAAGAATCAAAGTCTTGTTGCTTGATCA
AATGATCTGTTGAAAGGCGGAAACAGCTAGTTTACAAAAAAACTACAGATCCAGTTTGAAAATACATGACACTAGCAGCAGTATATTTGGTGTCA
AATCTTATTTTGTCATGTAATTCTTGTATTCTTCAAATGTTGGATCACATTCCACTTTAAGAGGATTGTACAGATGAGGATAATCAGAAGAAAAA
AAGTTGTAAGTAGTTTGTCAGAAAAGACAGCTGAAAGCTGAGATGAGTTCTTGTGGCTTCTTGGTGTAACCTGTTTACCATTTTGCTTTAGCATA
ATAAATTCTCTTTATTGTGTCTCTAAAAAAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E691234] | SGN-U565668 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T496194 [Download] [View] | Facility Assigned ID: LH_Ea05J08.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 12.5 |
Working
