EST details — SGN-E692166
| Search information |
| Request: 692166 | Match: SGN-E692166 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C469172 | Clone name: LH_Ea08A04 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C469172 [LH_Ea08A04] | Trace: SGN-T491467 | EST: SGN-E696006 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E692166 | Length: 858 bp (1082 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E692166 [] (trimmed)
TCTCGTGCCGAATTCGGCACGAGGGTTGCAAGACTTCTTTAATGGAAAGGAGCTTTGCAAGAGTATCAACCCAGATGAGGCTGTTGCCTATGGTG
CTGCTGTTCAAGCTGCCATTCTCAGTGGAGAGGGTAATGAGAAGGTACAAGACTTGTTGCTTTTGGATGTCACCCCTCTATCTCTTGGATTGGAA
ACTGCTGGAGGAGTCATGACTGTCTTGATTCCAAGGAATACCACCATTCCTACCAAGAAAGAGCAGGTGTTCTCTACCTATTCTGACAACCAGCC
TGGAGTGTTGATTCAGGTTTACGAGGGTGAGAGAGCTAGGACCAGAGACAACAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCTCCTGCTC
CTAGGGGTGTGCCTCAGATCACGGTCTGCTTTGACATTGATGCCAATGGCATCTTGAATGTCTCAGCTGAAGACAAGACCACTGGACAGAAGAAC
AAGATCACTATTACCAATGACAAGGGTAGGTTATCAAAGGAAGAAATTGAGAAGATGGTCCAGGAAGCAGAGAGGTACAAGGCAGAGGATGAGGA
GCACAAGAAAAAGGTTGAGGCCAAGAATGCACTTGAGAACTATGCCTACAACATGAGGAACACTATAAAGGATGATAAGATTAGTTCTAAGCTTA
GTGCAGACGACAAGAAAAAGATTGAGGATGCCATTGATCAGGCAATTTCATGGCTTGATAGCAACCAGCTTGCTGAAGCTGATGAGTTTGAAGAT
AAGATGAAGGAACTGGAGAGCCTATGTAATCCCATAATTGCAAAGATGTACCAGGGTGCTGGTGGTGAGGCAGGTGCACCTATGGATGATGATGA
TGC
CTGCTGTTCAAGCTGCCATTCTCAGTGGAGAGGGTAATGAGAAGGTACAAGACTTGTTGCTTTTGGATGTCACCCCTCTATCTCTTGGATTGGAA
ACTGCTGGAGGAGTCATGACTGTCTTGATTCCAAGGAATACCACCATTCCTACCAAGAAAGAGCAGGTGTTCTCTACCTATTCTGACAACCAGCC
TGGAGTGTTGATTCAGGTTTACGAGGGTGAGAGAGCTAGGACCAGAGACAACAACTTGTTGGGTAAATTTGAGCTCTCTGGTATTCCTCCTGCTC
CTAGGGGTGTGCCTCAGATCACGGTCTGCTTTGACATTGATGCCAATGGCATCTTGAATGTCTCAGCTGAAGACAAGACCACTGGACAGAAGAAC
AAGATCACTATTACCAATGACAAGGGTAGGTTATCAAAGGAAGAAATTGAGAAGATGGTCCAGGAAGCAGAGAGGTACAAGGCAGAGGATGAGGA
GCACAAGAAAAAGGTTGAGGCCAAGAATGCACTTGAGAACTATGCCTACAACATGAGGAACACTATAAAGGATGATAAGATTAGTTCTAAGCTTA
GTGCAGACGACAAGAAAAAGATTGAGGATGCCATTGATCAGGCAATTTCATGGCTTGATAGCAACCAGCTTGCTGAAGCTGATGAGTTTGAAGAT
AAGATGAAGGAACTGGAGAGCCTATGTAATCCCATAATTGCAAAGATGTACCAGGGTGCTGGTGGTGAGGCAGGTGCACCTATGGATGATGATGA
TGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E692166] | SGN-U579878 | Tomato 200607 | Build 2 | 84 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T495324 [Download] [View] | Facility Assigned ID: LH_Ea08A04.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |
Working
