EST details — SGN-E692332
Search information |
Request: 692332 | Match: SGN-E692332 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C469338 | Clone name: LH_Ea08H02 |
| ||
Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C469338 [LH_Ea08H02] | Trace: SGN-T491703 | EST: SGN-E696172 | Direction: 3' | Facility: AGI |
Sequence |
Sequence Id: SGN-E692332 | Length: 761 bp (1127 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E692332 [] (trimmed)
GTACAATATAATTTTATCGACCACACACAATGGTCTTTCAATCCTAGATAACGATTTTGCTAGCAAAAAAGAAACATGTTGATGATGGAAGAAGC
GAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGCGTTCCGTCGCGATATATTCGTG
TTAACGATGACGAAAATCAATTGTGTAATTCTTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATT
AAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAGTTGGTGAATCACGGAGTGAGTTCATCATTGAT
GGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAATTTGAGCAAGAGGAAGGAGATATCGAAGGATACG
GACAAGCATTTGTTGTATCTGAAGAACAAAAGCTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTG
TTTCCGAAGCTTCCCGCCTCACTCAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAG
AGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAAC
C
GAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGCGTTCCGTCGCGATATATTCGTG
TTAACGATGACGAAAATCAATTGTGTAATTCTTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATT
AAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAGTTGGTGAATCACGGAGTGAGTTCATCATTGAT
GGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAATTTGAGCAAGAGGAAGGAGATATCGAAGGATACG
GACAAGCATTTGTTGTATCTGAAGAACAAAAGCTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTG
TTTCCGAAGCTTCCCGCCTCACTCAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAG
AGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAAC
C
Unigenes |
Current Unigene builds | |||||
[SGN-E692332] | SGN-U586249 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T495151 [Download] [View] | Facility Assigned ID: LH_Ea08H02.f |
Submitter: Eyal Fridman | Sequencing Facility: AGI |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |