EST details — SGN-E692538
Search information |
Request: 692538 | Match: SGN-E692538 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C469544 | Clone name: LH_Ea08P16 |
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Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C469544 [LH_Ea08P16] | Trace: SGN-T491039 | EST: SGN-E696378 | Direction: 3' | Facility: AGI |
Sequence |
Sequence Id: SGN-E692538 | Length: 475 bp (1145 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E692538 [] (trimmed)
CCTTAATGTTATGGATATTCGTGGTCAAGATGATTTTAAGCTTATTCCTTTTGGTGTTGGTCGAAGAATGTGTCCTGCAATATCTTTGGCTATGA
GGACGGTTCCCATAATGTTGGGTTCGTTGTTGAATTCATTTGATTGGGTTGTTGAAGGCAACGATGATTTGGACGCGGAGGAGAAAAGTGGTCTT
ATTGTAGGCAAATTACGTCCTCTACGACTTGTCCCGATTTCACTATAGGACTATATATGGGATCAAATTGGACATGAAGCACTATTTCAATTGGC
ATGGAAGTAGCAAAAACTTAATAAAGTGGAGTCTATGAATTCATAATTTTTCGTAGATCATGTATTTATATTAAAAAATTAAATAAATATATATG
TATATTAACTTGTGAATCTACTATCAAAACTGTTGACTGATGTTTAGTGGTAAGGAAGGGGCCCATGAGAATGTTTTCTAGTTAAAAAAAAAAAA
GGACGGTTCCCATAATGTTGGGTTCGTTGTTGAATTCATTTGATTGGGTTGTTGAAGGCAACGATGATTTGGACGCGGAGGAGAAAAGTGGTCTT
ATTGTAGGCAAATTACGTCCTCTACGACTTGTCCCGATTTCACTATAGGACTATATATGGGATCAAATTGGACATGAAGCACTATTTCAATTGGC
ATGGAAGTAGCAAAAACTTAATAAAGTGGAGTCTATGAATTCATAATTTTTCGTAGATCATGTATTTATATTAAAAAATTAAATAAATATATATG
TATATTAACTTGTGAATCTACTATCAAAACTGTTGACTGATGTTTAGTGGTAAGGAAGGGGCCCATGAGAATGTTTTCTAGTTAAAAAAAAAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E692538] | SGN-U566284 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T494953 [Download] [View] | Facility Assigned ID: LH_Ea08P16.f |
Submitter: Eyal Fridman | Sequencing Facility: AGI |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.942 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 12.5 |