EST details — SGN-E693442
Search information |
Request: 693442 | Match: SGN-E693442 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C466608 | Clone name: LH_Ea01F08 |
| ||
Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C466608 [LH_Ea01F08] | Trace: SGN-T497896 | EST: SGN-E689602 | Direction: 5' | Facility: AGI |
Sequence |
Sequence Id: SGN-E693442 | Length: 504 bp (1178 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E693442 [] (trimmed)
TTTTTTTTTTTTTTAATGACAAAAATTTCAAGGTGGTATNATATGTTTTTTAAGTGGAATTGCGTTAAAANTACAGNAAAAATATAACCCTAAGA
CAGCAATGGGGATTAGCAAAATAATTATTGAAATATCGATAACAAGTACTTTGTCTCTTGGCTCAAATAAACTTCATTACTGAAAATTTATTCAT
CAACAGGCCGGTGGCCAAGAACTGAAATATCCTCGTAACGCTTCCCAACATTGTTCTTCTCCCAGAGCGTTTTAACGCCATAATCCACTGCCCGT
TCGCTGAGCAAAGCGCCGGCGATGACAAAGGTAACATAGACAGGGGTACGGCGCATAACCAGCCTGGAAAATACTTCAAGAACACCACCACCACT
TCTTCTAGCAGCTGATTCCATTTTCTGAGCTTAAAATCCCTACTGGGTTTCGCTTAGATTTGGTAATTTGTAGAGAAAACAGTTAAATTTTGAGA
AAATGCGATGATTTGTTTTGAGGTTTGAG
CAGCAATGGGGATTAGCAAAATAATTATTGAAATATCGATAACAAGTACTTTGTCTCTTGGCTCAAATAAACTTCATTACTGAAAATTTATTCAT
CAACAGGCCGGTGGCCAAGAACTGAAATATCCTCGTAACGCTTCCCAACATTGTTCTTCTCCCAGAGCGTTTTAACGCCATAATCCACTGCCCGT
TCGCTGAGCAAAGCGCCGGCGATGACAAAGGTAACATAGACAGGGGTACGGCGCATAACCAGCCTGGAAAATACTTCAAGAACACCACCACCACT
TCTTCTAGCAGCTGATTCCATTTTCTGAGCTTAAAATCCCTACTGGGTTTCGCTTAGATTTGGTAATTTGTAGAGAAAACAGTTAAATTTTGAGA
AAATGCGATGATTTGTTTTGAGGTTTGAG
Unigenes |
Current Unigene builds | |||||
[SGN-E693442] | SGN-U570518 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T494043 [Download] [View] | Facility Assigned ID: LH_Ea01F08.r |
Submitter: Eyal Fridman | Sequencing Facility: AGI |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.987 | Expected Error Rate: 0.0289 | Quality Trim Threshold: 14.5 |