EST details — SGN-E696118
| Search information |
| Request: 696118 | Match: SGN-E696118 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C469284 | Clone name: LH_Ea08E20 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C469284 [LH_Ea08E20] | Trace: SGN-T495212 | EST: SGN-E692278 | Direction: 5' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E696118 | Length: 880 bp (1099 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E696118 [] (trimmed)
TTTTTTTTTTTTTTTTTTTTTTTACTAAATCCACTTGGATAATTTAAACCATTTAGCAGAACAAGGGTTAACAAGAACCTAAAACATCTCATTTG
CAGGAAATCCCCCTCTTTTCCCCAAATCAATTTTTTTCCAATTTCAACCAGGCTAAAGAACTAATCTAAAAAACTGAATACAACCTCAAACACCA
TCCAAAATAAACACACTAAAATGTTACATAAAAGGCTGCAAAAAAGAAAAAGTTTCAATGCTGGCTACTTGGAGTTCTTCAAATCAACCACGACA
ACGCTGACGTTGTCGTACCTCCGCCTAGCAAGGGCTAGTTTAGTCAAAAGCACCGACGCATCAGAGCAACACTGGTCGGAATTCACCTCGCCGGC
GGTTCCAATTTCCGGCATTGACGCCGGCGATGCATTCCCTTTCAGGCACATCCCGGCAACGCCACATGCAGTGTCGTTTGAGACTACGTCCCATA
ATCCGTCGCTTGCTAAAATCAAACAGTCATCCTCCGACGTTCGATCAGTTATCGTCACTTCTGGCTCGCAGATCACATACGGCTTCAAATAATTA
TCACCAATGGCTCTTGACATAGCCAAAACGCCTGAAACACGAGGGCCGTCCCAGTAGATTACTCTGCCACCAGCTTCCTGGATGCGGATAAGTTC
ATCCGGACGATCCGGTTTTTGATCGTTAAAAAGAGGAATAGCTTTGCCATTCCGGCAAAGAATAGCTCTGGAATCACCACAATTCGCGACAATAA
TCTTGTCCGGCGTAACAACTGCGACTACCGCCGTTGAACCAACGGCGTCACATTCCGGTGTATGAAGTTCGCAACGGCATGTGGCTCCGGTTACG
CTCTTGTTCCATTCAATCACCTCTT
CAGGAAATCCCCCTCTTTTCCCCAAATCAATTTTTTTCCAATTTCAACCAGGCTAAAGAACTAATCTAAAAAACTGAATACAACCTCAAACACCA
TCCAAAATAAACACACTAAAATGTTACATAAAAGGCTGCAAAAAAGAAAAAGTTTCAATGCTGGCTACTTGGAGTTCTTCAAATCAACCACGACA
ACGCTGACGTTGTCGTACCTCCGCCTAGCAAGGGCTAGTTTAGTCAAAAGCACCGACGCATCAGAGCAACACTGGTCGGAATTCACCTCGCCGGC
GGTTCCAATTTCCGGCATTGACGCCGGCGATGCATTCCCTTTCAGGCACATCCCGGCAACGCCACATGCAGTGTCGTTTGAGACTACGTCCCATA
ATCCGTCGCTTGCTAAAATCAAACAGTCATCCTCCGACGTTCGATCAGTTATCGTCACTTCTGGCTCGCAGATCACATACGGCTTCAAATAATTA
TCACCAATGGCTCTTGACATAGCCAAAACGCCTGAAACACGAGGGCCGTCCCAGTAGATTACTCTGCCACCAGCTTCCTGGATGCGGATAAGTTC
ATCCGGACGATCCGGTTTTTGATCGTTAAAAAGAGGAATAGCTTTGCCATTCCGGCAAAGAATAGCTCTGGAATCACCACAATTCGCGACAATAA
TCTTGTCCGGCGTAACAACTGCGACTACCGCCGTTGAACCAACGGCGTCACATTCCGGTGTATGAAGTTCGCAACGGCATGTGGCTCCGGTTACG
CTCTTGTTCCATTCAATCACCTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E696118] | SGN-U563258 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T491329 [Download] [View] | Facility Assigned ID: LH_Ea08E20.r |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |
Working
