EST details — SGN-E696375
| Search information |
| Request: 696375 | Match: SGN-E696375 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C469541 | Clone name: LH_Ea08P13 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C469541 [LH_Ea08P13] | Trace: SGN-T494956 | EST: SGN-E692535 | Direction: 5' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E696375 | Length: 853 bp (1074 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E696375 [] (trimmed)
TTTTTTTTTTTTTTTTGATAATAAAATTACTACAACATGGGCTTTTCTTTATACATTTTTACTAATATTATAGCAAGCTCTAAAGTAGAAAGAGC
ATTGCTAATAATATTACATAATTGCCATTACAAAAGTTTTAATATAATATACTACGTACTCCACACATAATTAATTAATTGTGTGGCTTAGCTTG
AGTAACTTTGTCCATTGCCTCACCTTTATAGGAGCAACACCTATAGCAACCATTGTCACCATGGCCACAGCAACCATACTGGCAGTATCCACCAC
GTCGTCCACCACCACCGCCACCACGGTGTCCGTTTTTTTTTTTTTTTTTACTCTTTATATAATTTGCAACATGTTATAGATAAAAAGATTTAAAC
AAGAGTTATTGAGTTTGTCTGAACATAACATATCCAATATAGTTATACAAATGAAATCTGAAGATACCTCACGTAATATGAAATTATAGTTTGGG
GAAAATAAGTGGAGCACCATACTGAGGCTGAATGGTAAATATGGGTTGAGGAGCATGTGTGTAGGATGGAAACAATTCAAAAGAGAAGCTTTGTA
GGATCATACAGAGAGTCATTTTTGCTTCTAATATGGCAAAATTTTGTCCAATGCATATTCTTGGACCCCAAGCAAATGGAAAATATGCAACTTGA
CCCTTTGCTGCACTTGATATTCCTTCACTAAATCTCTCTGGATTGAACTTGTTTGCATCGTCACCCCATATATCTTTATCATGATGCAATAAGAT
TATTGGCAATGAGACTAGCACACCAGCTGGTAGAGATACTTCTCCTAATACTATGTCTTCCCTCGCCTGTCGCATTTGGGTTATTGATGGGGA
ATTGCTAATAATATTACATAATTGCCATTACAAAAGTTTTAATATAATATACTACGTACTCCACACATAATTAATTAATTGTGTGGCTTAGCTTG
AGTAACTTTGTCCATTGCCTCACCTTTATAGGAGCAACACCTATAGCAACCATTGTCACCATGGCCACAGCAACCATACTGGCAGTATCCACCAC
GTCGTCCACCACCACCGCCACCACGGTGTCCGTTTTTTTTTTTTTTTTTACTCTTTATATAATTTGCAACATGTTATAGATAAAAAGATTTAAAC
AAGAGTTATTGAGTTTGTCTGAACATAACATATCCAATATAGTTATACAAATGAAATCTGAAGATACCTCACGTAATATGAAATTATAGTTTGGG
GAAAATAAGTGGAGCACCATACTGAGGCTGAATGGTAAATATGGGTTGAGGAGCATGTGTGTAGGATGGAAACAATTCAAAAGAGAAGCTTTGTA
GGATCATACAGAGAGTCATTTTTGCTTCTAATATGGCAAAATTTTGTCCAATGCATATTCTTGGACCCCAAGCAAATGGAAAATATGCAACTTGA
CCCTTTGCTGCACTTGATATTCCTTCACTAAATCTCTCTGGATTGAACTTGTTTGCATCGTCACCCCATATATCTTTATCATGATGCAATAAGAT
TATTGGCAATGAGACTAGCACACCAGCTGGTAGAGATACTTCTCCTAATACTATGTCTTCCCTCGCCTGTCGCATTTGGGTTATTGATGGGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E696375] | SGN-U577654 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T491042 [Download] [View] | Facility Assigned ID: LH_Ea08P13.r |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
