EST details — SGN-E696840
Search information |
Request: 696840 | Match: SGN-E696840 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C470006 | Clone name: LH_Ea10C22 |
| ||
Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C470006 [LH_Ea10C22] | Trace: SGN-T494875 | EST: SGN-E693000 | Direction: 5' | Facility: AGI |
Sequence |
Sequence Id: SGN-E696840 | Length: 551 bp (1063 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E696840 [] (trimmed)
TTTTTTTTTTTTTTTTTTAAATAATTTGTTGCTATGACTTTTCAAAATTTTAGCGGACGCATGTCGGATTCTCCAAAAGTAGTGCACTTTAAAGA
ATTCGACACGGATGTTCTAAATTCGACACGAATGCAGCATCGAAAGTGAAGAGTCCACCCCAACTTAGGAAATAATACATCATTATTGTGAGGAT
ACAAATGAAACCACAAATACTTATTGTGAAGAATGAAGTACTTTATCTTCAATCTGATGAATTTCACTATGTTTGGAGTCTTTCCCCTTCAAGAA
ATTAGTGTACCAATGTGAAGAAAGCTTTGGATATCTTGTTAACTCTTTGTCATCCAAATCCACATAGTATAAGCCAAATCCTGAACCATATGCAT
CCAGTAACTCAAAACAGTCTAAGAATGACCACACGAAATAGCCTTTCACGTTTGATCCATTCCTCATAGCATCAAGCACATTCCCAATGTAAGCT
TGCAGATATTCCACTCTTCTTGTATCATTTAACGTACCATTTCGTCTTGTCATTTGACCTGGAAAACAGATCGATT
ATTCGACACGGATGTTCTAAATTCGACACGAATGCAGCATCGAAAGTGAAGAGTCCACCCCAACTTAGGAAATAATACATCATTATTGTGAGGAT
ACAAATGAAACCACAAATACTTATTGTGAAGAATGAAGTACTTTATCTTCAATCTGATGAATTTCACTATGTTTGGAGTCTTTCCCCTTCAAGAA
ATTAGTGTACCAATGTGAAGAAAGCTTTGGATATCTTGTTAACTCTTTGTCATCCAAATCCACATAGTATAAGCCAAATCCTGAACCATATGCAT
CCAGTAACTCAAAACAGTCTAAGAATGACCACACGAAATAGCCTTTCACGTTTGATCCATTCCTCATAGCATCAAGCACATTCCCAATGTAAGCT
TGCAGATATTCCACTCTTCTTGTATCATTTAACGTACCATTTCGTCTTGTCATTTGACCTGGAAAACAGATCGATT
Unigenes |
Current Unigene builds | |||||
[SGN-E696840] | SGN-U583154 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T490636 [Download] [View] | Facility Assigned ID: LH_Ea10C22.r |
Submitter: Eyal Fridman | Sequencing Facility: AGI |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.955 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 14.5 |