EST details — SGN-E704412
| Search information |
| Request: 704412 | Match: SGN-E704412 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C477578 | Clone name: FA24AH06 |
| ||
| Library Name: FA | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Fruit
Development Stage: Mixture of Immature green, mature green, breaker, turning, and red ripe stages
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E704412 | Length: 876 bp (1156 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E704412 [] (trimmed)
GGCTACGGCCTTGCAGTGGATATTTGGAGTTTGGGATGTACAATTCTTGAAATGGCAACTTCAAAGCCACCTTGGAGCCAGTATGAAGGGGTTGC
CGCCATATTTAAAATTGGAAACAGCAAAGACTTTCCTGAAATTCCAGAACACCTTTCTAATGATGCAAAAAGCTTTATAAGGTCATGCTTGCAGC
GGGAGCCGTCCCTACGACCTACAGCTTCTAAACTACTAGAGCACCCTTTTGTTAAAAACCAAAGTACAGCAAAAGTTGCTCATGTCGGTGTAACC
AAAGAATCATATCTTCGTTCCTTTGATGGAAGCCGGACACCGCCAGTGTTGGAGCTCCATCCTGGTGGAAGAACTATTTCTCCGGGAAGGAATAT
TTCCCCCGCTGAAGGAAACTATGCATCCCATCCGGTGATCACAGTCTCTAGACCATTGATCTGCGCAAGGGAAAATGTAAAAGCCATAACATCTT
TACCGGTATCCCCCACATCTAGCCCATTAAGACAGTATGAACCTGCCCGTAAAAGCTGTTATCTTTCTCCTCCTCACTCATCTTATGGCATCGGG
GGCCAGAGTGGATACGAGGCAAATGATTACTCAATGTTTCAAACAAGGCCCAGCACAAGAATCACACTTGAGCCATGGCTCGAAATCCCTCACTT
TAGAACTCAGACGCCATCTAGATCCCCCAAAACAAGACCCATTCTTTAGTAACATGTGATGTATGAGGTGAAAGTTTTCTTTACTTGCATTGCAC
CACGCGTGGTCGGTCCCCTTCTAGGAAATGAATTGCAGAAACTATGTCTCCTTCTAAGCTATTCGTTTCTGTTTGATGTGTCCATATCATCCAGA
GAAATTTTGGGTGACCTGGGG
CGCCATATTTAAAATTGGAAACAGCAAAGACTTTCCTGAAATTCCAGAACACCTTTCTAATGATGCAAAAAGCTTTATAAGGTCATGCTTGCAGC
GGGAGCCGTCCCTACGACCTACAGCTTCTAAACTACTAGAGCACCCTTTTGTTAAAAACCAAAGTACAGCAAAAGTTGCTCATGTCGGTGTAACC
AAAGAATCATATCTTCGTTCCTTTGATGGAAGCCGGACACCGCCAGTGTTGGAGCTCCATCCTGGTGGAAGAACTATTTCTCCGGGAAGGAATAT
TTCCCCCGCTGAAGGAAACTATGCATCCCATCCGGTGATCACAGTCTCTAGACCATTGATCTGCGCAAGGGAAAATGTAAAAGCCATAACATCTT
TACCGGTATCCCCCACATCTAGCCCATTAAGACAGTATGAACCTGCCCGTAAAAGCTGTTATCTTTCTCCTCCTCACTCATCTTATGGCATCGGG
GGCCAGAGTGGATACGAGGCAAATGATTACTCAATGTTTCAAACAAGGCCCAGCACAAGAATCACACTTGAGCCATGGCTCGAAATCCCTCACTT
TAGAACTCAGACGCCATCTAGATCCCCCAAAACAAGACCCATTCTTTAGTAACATGTGATGTATGAGGTGAAAGTTTTCTTTACTTGCATTGCAC
CACGCGTGGTCGGTCCCCTTCTAGGAAATGAATTGCAGAAACTATGTCTCCTTCTAAGCTATTCGTTTCTGTTTGATGTGTCCATATCATCCAGA
GAAATTTTGGGTGACCTGGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E704412] | SGN-U565431 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T504602 [Download] [View] | Facility Assigned ID: FA24AH06 |
| Submitter: None | Sequencing Facility: Kazusa1 |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
