EST details — SGN-E706574
| Search information |
| Request: 706574 | Match: SGN-E706574 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C479740 | Clone name: FA30BD04 |
| ||
| Library Name: FA | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Fruit
Development Stage: Mixture of Immature green, mature green, breaker, turning, and red ripe stages
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E706574 | Length: 881 bp (1212 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E706574 [] (trimmed)
GCCTGTTGCCATAGCTTCATTTGGTGCCATGGAGAAAGGCGTTCTTGTTTCCGCTTCTGCAGGAAATTTAGTTGACCCCCCTGAAGGACTCCACA
ATGGAATCCCCTGGCTCTTGACTACTGCTGCTGGCTCTATTGATCGTGTCCTCTCTGGAAAATTGACTCTTGGAAATGGACAAGTGATCAGTGGT
TGGTCAACGTACCCTGTTAGCGCCCTTGTCAACGAGTTCCCACTTATCTACAACGAGTCAATATCGAGTTGCAATTCAACTTCCATATCCAGCTT
CAGCAATAAAATCATCATATGCGAAAATGCAAAATTCCCTTTGCAAATTGATGTCATTGTTAAATCCTCTGCTATTGCTACTATATACATCTCTG
ATGATCCACTCATTTTCGAGAATGAAGTGTTTGAATATCCCGGAGTTGTTATCAGCCCTGAGGATGGTGCAGCTGTGATCAGTTATGCTAAATCT
GGTGCCGAACCTGTTGCCAGCATTAGCTTCCAACAGACAATCATGAGATCAACACCAGCACCCGTCGTTGCAACTTACTCATTACGAGGTCCTTC
GCCAAGCTACCCAGGAATCTTGAAGCCAGACATAATGGCACCAGGGTCATTAGTCTTGGCATCCTGGATTCCCAAAGGTTATACAACTTCTATAT
ATCCGGATATTAAATTGAGCAGTGAATTCGCGATGATTTCAGGAACATCCATGGCTTGTCCACATTCCTCTGGCATTGCTGCACTTCTTAAAGGC
GCACATCCTGAATGGAGTCCAGCAGCAATCCGTTCTGCAATGATCACTACTGCCATCAACATTGACAACACCAATTCTCCCATTAAAGATTCAGG
CCTAAACTACAGTATCGCGACTCCTC
ATGGAATCCCCTGGCTCTTGACTACTGCTGCTGGCTCTATTGATCGTGTCCTCTCTGGAAAATTGACTCTTGGAAATGGACAAGTGATCAGTGGT
TGGTCAACGTACCCTGTTAGCGCCCTTGTCAACGAGTTCCCACTTATCTACAACGAGTCAATATCGAGTTGCAATTCAACTTCCATATCCAGCTT
CAGCAATAAAATCATCATATGCGAAAATGCAAAATTCCCTTTGCAAATTGATGTCATTGTTAAATCCTCTGCTATTGCTACTATATACATCTCTG
ATGATCCACTCATTTTCGAGAATGAAGTGTTTGAATATCCCGGAGTTGTTATCAGCCCTGAGGATGGTGCAGCTGTGATCAGTTATGCTAAATCT
GGTGCCGAACCTGTTGCCAGCATTAGCTTCCAACAGACAATCATGAGATCAACACCAGCACCCGTCGTTGCAACTTACTCATTACGAGGTCCTTC
GCCAAGCTACCCAGGAATCTTGAAGCCAGACATAATGGCACCAGGGTCATTAGTCTTGGCATCCTGGATTCCCAAAGGTTATACAACTTCTATAT
ATCCGGATATTAAATTGAGCAGTGAATTCGCGATGATTTCAGGAACATCCATGGCTTGTCCACATTCCTCTGGCATTGCTGCACTTCTTAAAGGC
GCACATCCTGAATGGAGTCCAGCAGCAATCCGTTCTGCAATGATCACTACTGCCATCAACATTGACAACACCAATTCTCCCATTAAAGATTCAGG
CCTAAACTACAGTATCGCGACTCCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E706574] | SGN-U565053 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T502493 [Download] [View] | Facility Assigned ID: FA30BD04 |
| Submitter: None | Sequencing Facility: Kazusa1 |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
