EST details — SGN-E708977
Search information |
Request: 708977 | Match: SGN-E708977 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C482143 | Clone name: FA42BC05 |
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Library Name: FA | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Fruit
Development Stage: Mixture of Immature green, mature green, breaker, turning, and red ripe stages
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E708977 | Length: 916 bp (1233 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E708977 [] (trimmed)
CGCTTCTTTCCACATGGCCGTCGGCAAGAACAAGAGGATTTCCAAGGGAAAGAAGGGAGGAAAGAAGAAGGCGGCGGATCCCTACGCAAAGAAGG
ACTGGTATGACATCAAGGCACCATCTGTTTTTGAAATTAAGAACGTCGGCAAAACCCTTGTTACCAGGACTCAGGGTACCAAGATTGCTTCAGAG
GGTCTAAAACACAGAGTATTTGAAGTTAGCCTGGCTGATCTTCAGAAGGATGAGGATCAGGCTTTCAGGAAAATCCGTTTGAGAGCAGAAGATGT
GCAAGGGAGGAATGTTCTCACAAACTTCCATGGAATGGATTTCACAACAGATAAGCTGAGGTCTCTGGTCCGCAAATGGCAGACTTTGATTGAGG
CCCATGTTGATGTCAAGACTACAGACAGCTATACTCTAAGGATGTTCTGTATTGCTTTTACAAAGAAGCGTCCAAACCAACAGAAGCGTACCTGC
TATGCCCAGAGCAGCCAGATCCGTCAGATCCGCAGGAAGATGGTTGAGATCATGAGGAACCAAGCCAGTTCCTGTGACTTGAAGGAGTTAGTTGC
AAAATTCATCCCCGAATCAATTGGCAGGGAGATTGAGAAAGCAACTTCCAGCATCTTCCCCCTACAAAATGTCTATATTCGAAAGGTCAAGATCC
TCAAGGCCCCTAAATTTGACCTTGGCAAGCTGATGGAGGTTCATGGTGACTATTCAGAAGATGTTGGTGTGAAGTTGGATCGGCCAGCTGATGAG
ACAGTAGCTGAGGCAGAGGCCGAGGTCCCTGGATCTTAGACTTGTTTCATCCATCGAGTTACCTTACCCCATATGGTGGAAGTCTTTAGAGCATC
CACATTGTTTAAGTTGAGTTTTGTTGTGACATTCTGAAAATTTGCATCTGGGTTCTTGCCT
ACTGGTATGACATCAAGGCACCATCTGTTTTTGAAATTAAGAACGTCGGCAAAACCCTTGTTACCAGGACTCAGGGTACCAAGATTGCTTCAGAG
GGTCTAAAACACAGAGTATTTGAAGTTAGCCTGGCTGATCTTCAGAAGGATGAGGATCAGGCTTTCAGGAAAATCCGTTTGAGAGCAGAAGATGT
GCAAGGGAGGAATGTTCTCACAAACTTCCATGGAATGGATTTCACAACAGATAAGCTGAGGTCTCTGGTCCGCAAATGGCAGACTTTGATTGAGG
CCCATGTTGATGTCAAGACTACAGACAGCTATACTCTAAGGATGTTCTGTATTGCTTTTACAAAGAAGCGTCCAAACCAACAGAAGCGTACCTGC
TATGCCCAGAGCAGCCAGATCCGTCAGATCCGCAGGAAGATGGTTGAGATCATGAGGAACCAAGCCAGTTCCTGTGACTTGAAGGAGTTAGTTGC
AAAATTCATCCCCGAATCAATTGGCAGGGAGATTGAGAAAGCAACTTCCAGCATCTTCCCCCTACAAAATGTCTATATTCGAAAGGTCAAGATCC
TCAAGGCCCCTAAATTTGACCTTGGCAAGCTGATGGAGGTTCATGGTGACTATTCAGAAGATGTTGGTGTGAAGTTGGATCGGCCAGCTGATGAG
ACAGTAGCTGAGGCAGAGGCCGAGGTCCCTGGATCTTAGACTTGTTTCATCCATCGAGTTACCTTACCCCATATGGTGGAAGTCTTTAGAGCATC
CACATTGTTTAAGTTGAGTTTTGTTGTGACATTCTGAAAATTTGCATCTGGGTTCTTGCCT
Unigenes |
Current Unigene builds | |||||
[SGN-E708977] | SGN-U579808 | Tomato 200607 | Build 2 | 82 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T500082 [Download] [View] | Facility Assigned ID: FA42BC05 |
Submitter: None | Sequencing Facility: Kazusa1 |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.968 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |