EST details — SGN-E718942
Search information |
Request: 718942 | Match: SGN-E718942 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C492108 | Clone name: FC06BB11 |
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Library Name: FC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Fruit
Development Stage: Mixture of mature green, light green, breaker, turning, light red, and red ripe stages
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E718942 | Length: 946 bp (1378 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E718942 [] (trimmed)
GGGCGATTGGCGGCCAAATCGGCCGAATTGGAATCGTAAACGTTCACCGTTCTTCACTCTCCGCCCACTGTTCGCCAAATCCATAATGCGGAGAT
TCGTTGCTGATAAAGCCAAAACTCTCATCAATAGGAGCAGGACCACCTGTTCGTCTTCTTTTCCTCCTCCTATTATTACTTCTACTTCCGTGTTG
CAGCGGCTCACCTCTTCTTCTTCTTCTTCATCTCAATCAACTGCTGTTCTTCGTTTTTTATCCACTTCTTCTGATTCAATGGCTTCCGATTATTC
ATCCACTCCGGTCACTCTTAACAACGTTAACCCAAAGGTTTTGAAATGTGAATATGCTGTCCGAGGAGAAATAGTCAACCTTGCTCAGAAATTAC
AACAAGACCTCAAGGAGAATCCAGGCTCTCATCCCTTTGATGAGATCTTATACTGCAATATTGGAAATCCTCAATCCCTGGCTCAGCAGCCTATT
ACTTTCTTTAGGGAGGTCCTTGCATTATGTGATCATCCACTTATTTTGGACAAAAGTGAAACTCAAGGTTTGTTCAGTGCGGATTCAATAGAACG
AGCTTTTCAGATCCTCGACCAAATTCCTGGTAGAGCAACAGGTGCATACAGCCACAGTCAGGGTATCAAAGGATTACGTGATACAATTGCTTCTG
GTATCGAAGCTCGTGATGGCTTCCCTGCCGATCCAAATGATATTTTCTTGACTGATGGTGCAAGCCCTGCGGTTCACATGATGATGCAGTTGCTC
ATCGGGTCAGAGAATGACGGAATTCTCTGTCCCATCCCCCAATATCCTCTTTATTCTGCTTCGATTGCTCTCCATGGTGGCACTCTCGTTCCTTA
TTATCTTGATGAGGAAACAGGATGGGGACTTGAGGTCTCAGAGCTTGAGAATCAGCTGAAAACTGCAAAATCTAAGGGTATTAACGTTAGG
TCGTTGCTGATAAAGCCAAAACTCTCATCAATAGGAGCAGGACCACCTGTTCGTCTTCTTTTCCTCCTCCTATTATTACTTCTACTTCCGTGTTG
CAGCGGCTCACCTCTTCTTCTTCTTCTTCATCTCAATCAACTGCTGTTCTTCGTTTTTTATCCACTTCTTCTGATTCAATGGCTTCCGATTATTC
ATCCACTCCGGTCACTCTTAACAACGTTAACCCAAAGGTTTTGAAATGTGAATATGCTGTCCGAGGAGAAATAGTCAACCTTGCTCAGAAATTAC
AACAAGACCTCAAGGAGAATCCAGGCTCTCATCCCTTTGATGAGATCTTATACTGCAATATTGGAAATCCTCAATCCCTGGCTCAGCAGCCTATT
ACTTTCTTTAGGGAGGTCCTTGCATTATGTGATCATCCACTTATTTTGGACAAAAGTGAAACTCAAGGTTTGTTCAGTGCGGATTCAATAGAACG
AGCTTTTCAGATCCTCGACCAAATTCCTGGTAGAGCAACAGGTGCATACAGCCACAGTCAGGGTATCAAAGGATTACGTGATACAATTGCTTCTG
GTATCGAAGCTCGTGATGGCTTCCCTGCCGATCCAAATGATATTTTCTTGACTGATGGTGCAAGCCCTGCGGTTCACATGATGATGCAGTTGCTC
ATCGGGTCAGAGAATGACGGAATTCTCTGTCCCATCCCCCAATATCCTCTTTATTCTGCTTCGATTGCTCTCCATGGTGGCACTCTCGTTCCTTA
TTATCTTGATGAGGAAACAGGATGGGGACTTGAGGTCTCAGAGCTTGAGAATCAGCTGAAAACTGCAAAATCTAAGGGTATTAACGTTAGG
Unigenes |
Current Unigene builds | |||||
[SGN-E718942] | SGN-U580998 | Tomato 200607 | Build 2 | 69 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T524466 [Download] [View] | Facility Assigned ID: FC06BB11.f |
Submitter: None | Sequencing Facility: Kazusa2 |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |