EST details — SGN-E719028
Search information |
Request: 719028 | Match: SGN-E719028 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C492194 | Clone name: FC06CB12 |
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Library Name: FC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Fruit
Development Stage: Mixture of mature green, light green, breaker, turning, light red, and red ripe stages
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E719028 | Length: 878 bp (1371 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E719028 [] (trimmed)
GGCCAATCGGCCGAATAACTCATTGTTCTCTTCTCGAGCAAAACTCCAGTTTCTCTCGGCTGCTCTACCCTAATCTAGATCTCCGAAGATGACTA
ACCAGGCCGAGTCATCTGACTCAAAAGGTGCGAAGAAGGATTTCTCTACCGCGATTTTGGAGAGGAAGAAGTCTCCTAATCGGCTTGTTGTTGAT
GAGGCGGTCAACGATGATAACTCTGTTGTTGCACTGCACCCTGCTACTATGGAGAAGCTACAGCTCTTCCGTGGAGATACAATTCTCATCAAGGG
AAAGAAAAGGAAGGATACAGTTGTCATTGCTCTTGCTGATGAAACATGTGATGAGCCAAAGATTAGGATGAACAAGGTTGTCCGTTCAAATTTGA
GGGTCCGTCTTGGAGATGTTGTGTCTGTGCACCAATGCCCAGATGTTAAGTATGGGAAGCGTGTCCACATACTTCCTATAGATGATACAATAGAA
GGTCTCACCGGGGATTTGTTTGATGCGTTCCTGAAACCGTACTTTTTGGAAGCATATCGTCCTTTGAGGAAAGGAGACAATTTTCTTGTTAGAGG
GGGGATGAGAAGTGTGGAATTCAAAGTCATTGAGACTGACCCAGGGGAGTATTGTGTTGTTGCCCCAGACACTGAAATCTTTTGTGAGGGGGAGC
CTGTTAAAAGGGAGGATGAGGAGAGACTGGACGAAGTTGGCTATGATGATGTTGGTGGTGTGAGAAAACAGATGGCTCAAATTCGTGAACTGGTG
GAACTACCATTGAGGCATCCTCAACTTTTCAAATCCATTGGTGTGAAACCACCAAAGGGGATTTTACTTTATGGGCCCCCTGGTTCTGGGAAGAC
CCTGATAGCAAGAGCAGTGGCTA
ACCAGGCCGAGTCATCTGACTCAAAAGGTGCGAAGAAGGATTTCTCTACCGCGATTTTGGAGAGGAAGAAGTCTCCTAATCGGCTTGTTGTTGAT
GAGGCGGTCAACGATGATAACTCTGTTGTTGCACTGCACCCTGCTACTATGGAGAAGCTACAGCTCTTCCGTGGAGATACAATTCTCATCAAGGG
AAAGAAAAGGAAGGATACAGTTGTCATTGCTCTTGCTGATGAAACATGTGATGAGCCAAAGATTAGGATGAACAAGGTTGTCCGTTCAAATTTGA
GGGTCCGTCTTGGAGATGTTGTGTCTGTGCACCAATGCCCAGATGTTAAGTATGGGAAGCGTGTCCACATACTTCCTATAGATGATACAATAGAA
GGTCTCACCGGGGATTTGTTTGATGCGTTCCTGAAACCGTACTTTTTGGAAGCATATCGTCCTTTGAGGAAAGGAGACAATTTTCTTGTTAGAGG
GGGGATGAGAAGTGTGGAATTCAAAGTCATTGAGACTGACCCAGGGGAGTATTGTGTTGTTGCCCCAGACACTGAAATCTTTTGTGAGGGGGAGC
CTGTTAAAAGGGAGGATGAGGAGAGACTGGACGAAGTTGGCTATGATGATGTTGGTGGTGTGAGAAAACAGATGGCTCAAATTCGTGAACTGGTG
GAACTACCATTGAGGCATCCTCAACTTTTCAAATCCATTGGTGTGAAACCACCAAAGGGGATTTTACTTTATGGGCCCCCTGGTTCTGGGAAGAC
CCTGATAGCAAGAGCAGTGGCTA
Unigenes |
Current Unigene builds | |||||
[SGN-E719028] | SGN-U578906 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T524380 [Download] [View] | Facility Assigned ID: FC06CB12.f |
Submitter: None | Sequencing Facility: Kazusa2 |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0021 | Quality Trim Threshold: 20.5 |