EST details — SGN-E722474
Search information |
Request: 722474 | Match: SGN-E722474 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C495640 | Clone name: FC17BE09 |
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Library Name: FC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Fruit
Development Stage: Mixture of mature green, light green, breaker, turning, light red, and red ripe stages
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E722474 | Length: 1005 bp (1481 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E722474 [] (trimmed)
ATCGGCCGAATTGACAGTGTCCTTCTCCTTCGCCCATCATCTCTCTCTTTAAATATGGCTGAAAATAGTGGAAAAGCGATTGGAAGAAACTCAGG
AACCTCCCGTGTTGCGCTTAATGAAAGAATTCTTTCCTCCATGTCACGAAAATCTATTGCTGCTCATCCATGGCATGACCTAAAGATTGGGCCAG
GTGCACCTTCAGTTTTCAACTGTGTGGTTGAAATAGGCAAAGGCAGCAAAGTCAAGTATGAGCTTGACAAGGCAAGTGGCCTTATAAAGGTTGAC
CGAATACTGTACTCATCAGTTGTTTATCCACACAACTATGGTTTCATTCCAAGAACCCTTTGCGAAGACAGTGATCCAATGGACGTCTTGGTACT
GATGCAGGAACCTGTGTTACCAAGTACCTTTCTTCGTGCTCGTGCAATTGGATTGATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATAA
TAGCAGTGTGTGCAGATGATCCCGAGTTTCGCCACTACACAGACATCAAGGAGCTTCCTCCTCATCGTCTTGCTGAAATTCGGCGCTTTTTTGAA
GACTATAAAAAGAATGAGAACAAGTCAGTTGCCGTTGAGGACTTTCTTCCTGCTGAAGCAGCTGTAGATGCCATCAAGTATTCCATGGACCTGTA
TGCTTCTTACATTGTGGAAAGTTTGAGGAAGTGACCTTGTTGAGGACTTGTTGTCACTACTGAAAATCGAAGCAGAAAAGCCAGTTGACTTGTTG
ACGATGGCTCCCTGAATTTCATATGCATACTTTAGTTTAATGTGGTAGTATCAAATACTATTTGAAATGCATGTAGAACTTTCAATTTTCATGAA
TTCAGTAAAGACGTGGAACAGAAAGCATCAAGAAAACCACTGGTAATGTGCAGTGGTAGTGCTGTAAAAAAAATGTTTGCTTAATCTCAGCATCT
ACAAAAGTTTACAACATAATGAACTTGCTAGCTATCTTGTTTTGATGGGTTTTGT
AACCTCCCGTGTTGCGCTTAATGAAAGAATTCTTTCCTCCATGTCACGAAAATCTATTGCTGCTCATCCATGGCATGACCTAAAGATTGGGCCAG
GTGCACCTTCAGTTTTCAACTGTGTGGTTGAAATAGGCAAAGGCAGCAAAGTCAAGTATGAGCTTGACAAGGCAAGTGGCCTTATAAAGGTTGAC
CGAATACTGTACTCATCAGTTGTTTATCCACACAACTATGGTTTCATTCCAAGAACCCTTTGCGAAGACAGTGATCCAATGGACGTCTTGGTACT
GATGCAGGAACCTGTGTTACCAAGTACCTTTCTTCGTGCTCGTGCAATTGGATTGATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATAA
TAGCAGTGTGTGCAGATGATCCCGAGTTTCGCCACTACACAGACATCAAGGAGCTTCCTCCTCATCGTCTTGCTGAAATTCGGCGCTTTTTTGAA
GACTATAAAAAGAATGAGAACAAGTCAGTTGCCGTTGAGGACTTTCTTCCTGCTGAAGCAGCTGTAGATGCCATCAAGTATTCCATGGACCTGTA
TGCTTCTTACATTGTGGAAAGTTTGAGGAAGTGACCTTGTTGAGGACTTGTTGTCACTACTGAAAATCGAAGCAGAAAAGCCAGTTGACTTGTTG
ACGATGGCTCCCTGAATTTCATATGCATACTTTAGTTTAATGTGGTAGTATCAAATACTATTTGAAATGCATGTAGAACTTTCAATTTTCATGAA
TTCAGTAAAGACGTGGAACAGAAAGCATCAAGAAAACCACTGGTAATGTGCAGTGGTAGTGCTGTAAAAAAAATGTTTGCTTAATCTCAGCATCT
ACAAAAGTTTACAACATAATGAACTTGCTAGCTATCTTGTTTTGATGGGTTTTGT
Unigenes |
Current Unigene builds | |||||
[SGN-E722474] | SGN-U565218 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T521574 [Download] [View] | Facility Assigned ID: FC17BE09.f |
Submitter: None | Sequencing Facility: Kazusa2 |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.979 | Expected Error Rate: 0.0021 | Quality Trim Threshold: 20.5 |