EST details — SGN-E728012
Search information |
Request: 728012 | Match: SGN-E728012 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C501178 | Clone name: LA16BG01 |
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Library Name: LA | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Leaf
Development Stage: Mature leaves
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E728012 | Length: 810 bp (1304 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E728012 [] (trimmed)
GCCACCTTGCAAAACTTCTTTTGTGCTATTTTTCTTTGCTATTGCTCTTTTTCTTCGTGATGTAACTTCTATAGGTGTTAATTACGGGACTCTCG
GAAACAACCTCCCTCCGCCAGCTCAAGTAGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATC
CTCCGTGCTTTTGCAAACACGGGAATCTCGCTAACAATCACAGTACCAAATGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATA
CGTCGAGCAGAATATCATACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTAC
AGAACAAGCTTGTTCCAGCTATGAAGGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGT
ATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGATGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTNGAAA
CAAAAGGTCCTTTTATGGTAAATCCCTATCCCTACTTCGGATACNACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTAC
GATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGA
GATTGTTGCTGCTGAGACAGGGTGGCCTTCGCAAGGAGAAGCGTATGAAC
GAAACAACCTCCCTCCGCCAGCTCAAGTAGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAACCCTGACATC
CTCCGTGCTTTTGCAAACACGGGAATCTCGCTAACAATCACAGTACCAAATGGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATA
CGTCGAGCAGAATATCATACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCACTGGGATACACCTGAGGTAC
AGAACAAGCTTGTTCCAGCTATGAAGGTTTTTTACCAAGCTTTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGT
ATTCTACTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGATGGGATGTGGGTATTCTAGCTCCGATGCTACAATTTCTTCGTNGAAA
CAAAAGGTCCTTTTATGGTAAATCCCTATCCCTACTTCGGATACNACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTAC
GATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTGTATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGA
GATTGTTGCTGCTGAGACAGGGTGGCCTTCGCAAGGAGAAGCGTATGAAC
Unigenes |
Current Unigene builds | |||||
[SGN-E728012] | SGN-U584503 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T530165 [Download] [View] | Facility Assigned ID: LA16BG01 |
Submitter: None | Sequencing Facility: Kazusa1 |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.993 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 14.5 |