EST details — SGN-E728171
| Search information |
| Request: 728171 | Match: SGN-E728171 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C501337 | Clone name: LA16DG05 |
| ||
| Library Name: LA | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Leaf
Development Stage: Mature leaves
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E728171 | Length: 712 bp (1350 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E728171 [] (trimmed)
GTAAAAAAGGGTGGCTCGATTGTTGTCTCCTGTTTGTACAGATTCACTAAAATTACAGAACACCGTTCAGTGTTTCTATACAAGAAGTAAAGTTC
CAATTTTGGGTAATAATTTTAGCTCAATGGGTGTTTTTGGAAAGAAGAGAGGAGGATTATGGAGGATTAAAGTTGCTTATCAAGATTCTGCTGCT
GCATCTGAGGAAATTGCTGATGATTTTTATGCTGTTTTGGGTTTGCTTCCTGATGCTACACCTGCTCAAATAAAGAAGGCATACTATAGTTGCAT
GAAAGCTTGCCATCCAGATTTGAGTGGTGATGATCCCGAGACCACAAATTTTTGCATGTTTATCAATGAGGTCTATGAGATTCTTAGTGATCCAG
TGCAAAGGAGAGTTTATGATGAGATCCATGGGTACACAGCCACAGCAATTAACCCTTTCCTGAGCGATTCATCGCCGAAAGATCATGTATTTGTT
GACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTAGAGTTTACTA
TCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTGTCTTTGCTTG
AGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTA
CAATTTTGGGTAATAATTTTAGCTCAATGGGTGTTTTTGGAAAGAAGAGAGGAGGATTATGGAGGATTAAAGTTGCTTATCAAGATTCTGCTGCT
GCATCTGAGGAAATTGCTGATGATTTTTATGCTGTTTTGGGTTTGCTTCCTGATGCTACACCTGCTCAAATAAAGAAGGCATACTATAGTTGCAT
GAAAGCTTGCCATCCAGATTTGAGTGGTGATGATCCCGAGACCACAAATTTTTGCATGTTTATCAATGAGGTCTATGAGATTCTTAGTGATCCAG
TGCAAAGGAGAGTTTATGATGAGATCCATGGGTACACAGCCACAGCAATTAACCCTTTCCTGAGCGATTCATCGCCGAAAGATCATGTATTTGTT
GACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTAGAGTTTACTA
TCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTGTCTTTGCTTG
AGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E728171] | SGN-U566991 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T530006 [Download] [View] | Facility Assigned ID: LA16DG05 |
| Submitter: None | Sequencing Facility: Kazusa1 |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0159 | Quality Trim Threshold: 14.5 |
Working
