EST details — SGN-E730476
Search information |
Request: 730476 | Match: SGN-E730476 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C503642 | Clone name: LA24BA06 |
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Library Name: LA | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Leaf
Development Stage: Mature leaves
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E730476 | Length: 914 bp (1094 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E730476 [] (trimmed)
GCTATCCATTGCAGCAGATCAGCCATTCCGATTTCCTGCCACATTTACTTTTGTGGTTAGAGCATTTTCAGTTTTGGATGGCATTGGGAAGGGTC
TTGATCCACGATTTGATATCACTGAGATAGCCAAACCCTATGCCCTAGAGTTGCTTAGGTTTCGTGAAGCTGGTATTGAAGTCGCGGTAAAGGAC
TTCAGGAAGAGATGGGACAGACAGTCTCAGGCATTCTACAACTTGTTCAGGCAGGCTGATAGAGTTGAGAAACTTGCTGCAATTATCCAGCGACT
GGAGCAAGGTGACCTTAAGCTTCGGGTTAGAGCTTTAGAATCTGAAAGGGCTTTCCAACGTGTTGCTGCTGTTCAGAAGACAATTGGAAGTGGAG
TAGCCGCTGGAAGCTTGGTTAACCTAGCTACAATTTTGTATCTCAACTCCGTCCGTATCCCCTCTATTATAGCGTACACTGCCTGTGCATTCTTT
GGCTTCCAAGTCCTGTTTGGCCTTCTGAAGGTTAAAAAATTAGATGAACGAGAAAGATTGATTACTGGAACAGCTTGAACAAATGGAACAGCTTG
AACAAATGTACAGGTTATGCTGTGATATAATATATGGGAACTGCTATTCCAAGCTGTAACCCTGGAAAAAACAAAAATAACATGGAGGGGACTTA
ACGGATCATTGAGGATTCATAGCACTCCCATGGCCAAGAGTTGCCAGTTTTGTCATTCAGCTTTAAGATGCATCATGTGGTAAGGCTTCCAATAT
GGAGTTTAACTTCTAATTATGTTGGCCAAAACAGATTGTTGTATTTCGCCATCTCCACTATAGAGCAGTCCTGTGAAGTAGTCCAAATAAGAAAT
ATCTTTCATGTAGTATGACACCCATTTTGACCTTCTGTAGCCTTAGTGTATAGGTATAC
TTGATCCACGATTTGATATCACTGAGATAGCCAAACCCTATGCCCTAGAGTTGCTTAGGTTTCGTGAAGCTGGTATTGAAGTCGCGGTAAAGGAC
TTCAGGAAGAGATGGGACAGACAGTCTCAGGCATTCTACAACTTGTTCAGGCAGGCTGATAGAGTTGAGAAACTTGCTGCAATTATCCAGCGACT
GGAGCAAGGTGACCTTAAGCTTCGGGTTAGAGCTTTAGAATCTGAAAGGGCTTTCCAACGTGTTGCTGCTGTTCAGAAGACAATTGGAAGTGGAG
TAGCCGCTGGAAGCTTGGTTAACCTAGCTACAATTTTGTATCTCAACTCCGTCCGTATCCCCTCTATTATAGCGTACACTGCCTGTGCATTCTTT
GGCTTCCAAGTCCTGTTTGGCCTTCTGAAGGTTAAAAAATTAGATGAACGAGAAAGATTGATTACTGGAACAGCTTGAACAAATGGAACAGCTTG
AACAAATGTACAGGTTATGCTGTGATATAATATATGGGAACTGCTATTCCAAGCTGTAACCCTGGAAAAAACAAAAATAACATGGAGGGGACTTA
ACGGATCATTGAGGATTCATAGCACTCCCATGGCCAAGAGTTGCCAGTTTTGTCATTCAGCTTTAAGATGCATCATGTGGTAAGGCTTCCAATAT
GGAGTTTAACTTCTAATTATGTTGGCCAAAACAGATTGTTGTATTTCGCCATCTCCACTATAGAGCAGTCCTGTGAAGTAGTCCAAATAAGAAAT
ATCTTTCATGTAGTATGACACCCATTTTGACCTTCTGTAGCCTTAGTGTATAGGTATAC
Unigenes |
Current Unigene builds | |||||
[SGN-E730476] | SGN-U579429 | Tomato 200607 | Build 2 | 48 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T527784 [Download] [View] | Facility Assigned ID: LA24BA06 |
Submitter: None | Sequencing Facility: Kazusa1 |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.978 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |