EST details — SGN-E737978
| Search information |
| Request: 737978 | Match: SGN-E737978 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C511144 | Clone name: LC11DF05 |
| ||
| Library Name: LC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Leaf
Development Stage: Mature leaves
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E737978 | Length: 890 bp (1101 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E737978 [] (trimmed)
GCTCATCAGCTTCGGAGCTAAAAACCGATTCCGAAATATCTTCTCGTCGGAGCGGAAAAACGCCGCCGCGGCCTGAATCTACTCTACCGGAGACC
GTCATTTCTCGCCGGCGTATAGATTTCAGCTCATTTACAGGCAAAATCTGAGGTATACTTATCCAAAACCCTAGATTTCTCGGAGTCTCCCTTGG
GAGACTGAAATAGTTAGCAAACATGAGGATTATGATAAAGGGAGGAGTATGGAAGAACACGGAGGATGAGATTCTAAAGGCGGCGGTGATGAAGT
ATGGGAAGAATCAGTGGGCTCGTATTTCTTCTTTACTTGTTCGTAAATCTGCTAAGCAGTGTAAAGCTCGCTGGTATGAATGGCTCGATCCTTCA
ATTAAGAAGACTGAATGGACTAGAGAGGAGGATGAAAAACTACTTCACCTTGCAAAACTCATGCCTACCCAATGGAGGACAATTGCGCCAATCGT
TGGCCGTACACCATCACAATGCCTTGAACGTTATGAGAAGCTTCTCGATGCAGCATGTACTAAGGATGAGAACTATGATCCTAATGATGATCCAA
GAAAATTGAAGCCCGGAGAGATTGATCCTAACCCGGAATCAAAGCCTGCTCGTCCTGATCCTGTTGATATGGATGAGGACGAGAAAGAAATGCTT
TCTGAAGCACGGGCTAGGTTGGCCAACACAAGAGGCAAGAAGGCTAAAAGGAAAGCCAGAGAAAAGCAGCTTGAAGAGGCGCGGAGGCTTGCTTC
TTTACAGAAGAGGAGAGAACTGAAGGCTGCTGGAATAGATGTCCGTCAAAGGAAGAGAAAAAGGAGAGGTATTGATTACAATGCTGAAAATTCCC
TTTGAAAAAAAGCCTCCTCCAGGTTTCTATGATGT
GTCATTTCTCGCCGGCGTATAGATTTCAGCTCATTTACAGGCAAAATCTGAGGTATACTTATCCAAAACCCTAGATTTCTCGGAGTCTCCCTTGG
GAGACTGAAATAGTTAGCAAACATGAGGATTATGATAAAGGGAGGAGTATGGAAGAACACGGAGGATGAGATTCTAAAGGCGGCGGTGATGAAGT
ATGGGAAGAATCAGTGGGCTCGTATTTCTTCTTTACTTGTTCGTAAATCTGCTAAGCAGTGTAAAGCTCGCTGGTATGAATGGCTCGATCCTTCA
ATTAAGAAGACTGAATGGACTAGAGAGGAGGATGAAAAACTACTTCACCTTGCAAAACTCATGCCTACCCAATGGAGGACAATTGCGCCAATCGT
TGGCCGTACACCATCACAATGCCTTGAACGTTATGAGAAGCTTCTCGATGCAGCATGTACTAAGGATGAGAACTATGATCCTAATGATGATCCAA
GAAAATTGAAGCCCGGAGAGATTGATCCTAACCCGGAATCAAAGCCTGCTCGTCCTGATCCTGTTGATATGGATGAGGACGAGAAAGAAATGCTT
TCTGAAGCACGGGCTAGGTTGGCCAACACAAGAGGCAAGAAGGCTAAAAGGAAAGCCAGAGAAAAGCAGCTTGAAGAGGCGCGGAGGCTTGCTTC
TTTACAGAAGAGGAGAGAACTGAAGGCTGCTGGAATAGATGTCCGTCAAAGGAAGAGAAAAAGGAGAGGTATTGATTACAATGCTGAAAATTCCC
TTTGAAAAAAAGCCTCCTCCAGGTTTCTATGATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E737978] | SGN-U584440 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T539081 [Download] [View] | Facility Assigned ID: LC11DF05 |
| Submitter: None | Sequencing Facility: Kazusa1 |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 20.5 |
Working
