EST details — SGN-E739916
| Search information |
| Request: 739916 | Match: SGN-E739916 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C513082 | Clone name: LC19BD03 |
| ||
| Library Name: LC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Leaf
Development Stage: Mature leaves
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E739916 | Length: 937 bp (1188 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E739916 [] (trimmed)
GCAATTATATGCATGTTAAGAATTAATTATGCAACTCAATGTTGTGCAGCTGTACAATTCCTCACAAAGAAGCCGCTCTTGACTGCTGTGCTGAA
ATTGATCCTACTGCTAAGGCAATAGGGGCTGTCAATTGTATTATAAGGCGACCTGATGGGAAGTTATTTGGTTGTAATACAGACTATATCGGTGC
TATTTCCGCCATTGAAGAAGGATTGCAAGGTTCACAACCTAGTATATCTGGGTCACCTTTGGCTGGTAAATTGTTTGTGGTCATTGGTGCTGGTG
GCGCTGGAAAGGCGATTGCTTATGGCGCAAAGGAAAAGGGGGCTAGGGTGGTGATTGCTAATCGTACCTATGAACGAGCGCGAGAACTTGCTATT
GTTGTTGGAGCTGAGGCCTTATCTCTTGACGAGCTTAGCAATTTCCATCCAGAAAATGATATGATTCTTGCAAATACCACCTCCATAGGCATGCA
ACCAAAGGTTGATGATACACCAATCTCTAAGGAAGCTTTGAAGCACTACTCACTTGTTTTCGATGCTGTTTATACACCCAAAATCACTAGACTCC
TGCGAGAAGCTCAGGAGAGTGGAGCAAAAATTGTGACAGGAGTTGAAATGTTTATCGGGCAGGCATATGAACAATATGAAAGATTTACAGGATTG
CCAGCTCCTAAGGAACTTTTCAAGAATATAATGTCTACATACTGAGAGGATCCCTTTCACTTTTCAATCGGGGCTGCTAATTATTATTACTCCTA
AATCTGACATGATTGTGTTAGAGTTTGCTCTATCTACCACTGTTTGTACTTCAGAGGAAGTAATTTTGTCCACGTAAATCGTACTTTTTTGCGAA
ACAGAGGATGTTCAGACATACCAGTTAATCTATGGCAGGAAAATCCACCATCTTTCTGGGCTATGTAGAACTCTTGATTCTT
ATTGATCCTACTGCTAAGGCAATAGGGGCTGTCAATTGTATTATAAGGCGACCTGATGGGAAGTTATTTGGTTGTAATACAGACTATATCGGTGC
TATTTCCGCCATTGAAGAAGGATTGCAAGGTTCACAACCTAGTATATCTGGGTCACCTTTGGCTGGTAAATTGTTTGTGGTCATTGGTGCTGGTG
GCGCTGGAAAGGCGATTGCTTATGGCGCAAAGGAAAAGGGGGCTAGGGTGGTGATTGCTAATCGTACCTATGAACGAGCGCGAGAACTTGCTATT
GTTGTTGGAGCTGAGGCCTTATCTCTTGACGAGCTTAGCAATTTCCATCCAGAAAATGATATGATTCTTGCAAATACCACCTCCATAGGCATGCA
ACCAAAGGTTGATGATACACCAATCTCTAAGGAAGCTTTGAAGCACTACTCACTTGTTTTCGATGCTGTTTATACACCCAAAATCACTAGACTCC
TGCGAGAAGCTCAGGAGAGTGGAGCAAAAATTGTGACAGGAGTTGAAATGTTTATCGGGCAGGCATATGAACAATATGAAAGATTTACAGGATTG
CCAGCTCCTAAGGAACTTTTCAAGAATATAATGTCTACATACTGAGAGGATCCCTTTCACTTTTCAATCGGGGCTGCTAATTATTATTACTCCTA
AATCTGACATGATTGTGTTAGAGTTTGCTCTATCTACCACTGTTTGTACTTCAGAGGAAGTAATTTTGTCCACGTAAATCGTACTTTTTTGCGAA
ACAGAGGATGTTCAGACATACCAGTTAATCTATGGCAGGAAAATCCACCATCTTTCTGGGCTATGTAGAACTCTTGATTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E739916] | SGN-U570852 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T537079 [Download] [View] | Facility Assigned ID: LC19BD03 |
| Submitter: None | Sequencing Facility: Kazusa1 |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
