EST details — SGN-C173867

Search information 
Request: 173867Match: SGN-C173867
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173867Clone name: TUS-17-E1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173867 is on microarray TOM1 spot ID 1-1-8.1.18.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5751 [cLEC-32-O23] Trace: SGN-T29808 EST: SGN-E207595 Direction: 5' Facility: TIGR
Clone: SGN-C173867 [TUS-17-E1] Trace: SGN-T191634 EST: SGN-E390308 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396137Length: 606 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396137 [] (trimmed) GACACAAACAAAACTGAAACATTGCGAAAATTCTCATTAACCAGCTGCAGTAATAGTTCTTTACCCAAGACAAAAATCCCTCAAATATCCAAAAA
GTTAAAATGGAACACTATTCAAAAAAACACAAATTTAAGAATAGCAGTGTTGGCAATCCTGGAAAACACCCAATTTAAAACTACACGATAGCGTT
GGCGGCGCTTGCAATCCTGGGCCACAAATCAGCACACTCTTTTCCGATAGGACCAGTAATAGCAAAACCCTTCATTTCACCCTTGGGATTCACAA
TTACACCACCATTATCTTCAAAGTACATGAAAACACCATCCTTTCGACGCCATGGCTTGCGCTGACGAACAATGACAGAAGGCATAACCTTCTTC
CGCAGATCAGGCTTACCCTTCTTGACAGTGGCCATGACCATGTCACCCACGCAAGCTGAAGGCAACCTGTTAAGCCTTCCCTTGATACCCTTCAC
TGAAATGATGTAAAGGTTCTTTGCACCAGTGTTAACGGCACAGTTAACTGTGGCCGCCACTGGCAAACCCAGAGACATCCTGAACTTGTTCCCAG
CGGAACCTCCGCGACCTTTTTTTTTTTTTCTATTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396137] SGN-U580720 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197463 [Download][View] Facility Assigned ID: FA0AAD5AC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0111 Quality Trim Threshold: 14.5