EST details — SGN-C174247

Search information 
Request: 174247Match: SGN-C174247
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C174247Clone name: TUS-18-D21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174247 is on microarray TOM1 spot ID 1-1-4.4.16.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7448 [cLEC-38-P22] Trace: SGN-T31754 EST: SGN-E209219 Direction: 5' Facility: TIGR
Clone: SGN-C174247 [TUS-18-D21] Trace: SGN-T197225 EST: SGN-E395899 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E395900Length: 655 bp (870 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395900 [] (trimmed) TTGGACTGCCTGATATAAGAGGAAGAGAAGAAATATTGAAAGTTCACAGTAACAACAAGAAGCTTGACAAAGATGTGTCTCTAAGTGTTATTGCA
ATGAGAACACCAGGATTCAGTGGTGCAGATCTTGCAAACCTGATGAATGAAGCTGCCATTCTAGCTGGAAGGAGAGGAAAAGATAAGATTACCTC
AAAAGAGATAGATGATTCCATCGATAGAATTGTCGCTGGAATGGAAGGAACTACCATGACAGATGGAAAGAACAAGATTCTGGTAGCATACCATG
AGGTTGGACATGCTGTCTGCGCGACATTGACCCCTGGCCATGATGCAGTACAGAAAGTCACATTGATCCCAAGAGGTCAAGCTCGCGGTCTTACA
TGGTTCATTCCTGGTGAAGATCCAACCTTAATCTCTAAGAAGCAACTCTTTGCTAGAATAGTGGGAGGCTTAGGAGGTAGAGCAGCAGAGGAAAT
AATTTTTGGTGAACCAGAAATCACTACTGGTGCAGCAGGAGACTTGCAACAAATAACTCAAATAGCAAGACAGGTATTCACTCAAGCACATTTTC
TTGTTGCACCTACTAAAGAAAACAACATAATCGAATACTCACAAGTTTTCACTTGTCAATATTCGCAACCTGAGCAGATGGTTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395900] SGN-U564706 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197226 [Download][View] Facility Assigned ID: FA0AAD6CB11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5