EST details — SGN-C174330

Search information 
Request: 174330Match: SGN-C174330
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C174330Clone name: TUS-18-H8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174330 is on microarray TOM1 spot ID 1-1-1.4.16.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7976 [cLEC-40-O10] Trace: SGN-T32273 EST: SGN-E210209 Direction: 5' Facility: TIGR
Clone: SGN-C174330 [TUS-18-H8] Trace: SGN-T197338 EST: SGN-E396012 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396013Length: 528 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396013 [] (trimmed) ACAAGGTCTTCCTCCTGGAGCTCCAAATCCTCCACCCAGAGGCCCACCATCTGGATCAATGCCTCCACCCCCTCCCCTTATGGGTAACGGACCTA
GACCTATGCCACCAGGAGGTAACTTACCTGCCCCACCACCTCCTCCCGTTGGTGGTGGAGCTATGGCTAATTTCACTCCAGGTGGACACATGGGT
AGACCTCCAATGATGCCTCCACAAGGTTTTCCAGGTCAACAACAGATGCAAGGCCAAGGAATGCGCCCACCACCTCCACCACCCAACATGGGTTG
ATGAACCGAAGTCATAGAACCTACCTTTAATTGCATGGTACGAAAATTCGACTTTTCGTGCTGATTTTTGAGTTTGTGGTTTTCGTCCATTTAAA
TCTTTCAAAATCATTTATGTTGCCAGAAACTGTTGTATCTGTTAGGCCGACTCGTTTATCTTTGAAGGCTTTTGAGAATGTAATAGAATACCATT
TTAAAAGCAGCTTATTGCTTTTCAGATCCTAAGATTAAAAAAAAGCAACTTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396013] SGN-U579036 Tomato 200607 Build 2 45 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197339 [Download][View] Facility Assigned ID: FA0AAD6DD04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5