EST details — SGN-C174641

Search information 
Request: 174641Match: SGN-C174641
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C174641Clone name: TUS-19-E7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174641 is on microarray TOM1 spot ID 1-1-2.1.15.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23345 [cLED-5-C19] Trace: SGN-T49745 EST: SGN-E231129 Direction: 5' Facility: TIGR
Clone: SGN-C174641 [TUS-19-E7] Trace: SGN-T199883 EST: SGN-E398557 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396092Length: 416 bp (920 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396092 [] (trimmed) CAAAAAAAAATAAGAATATATATATATATATATATATTCAACATCCAACATATTCTCATTACTGCAGTCACATATCGCTCACAATTCAAATGGTA
AGAAAATACTCTTCAAAGAACATTGATATAAATTCAACAAAGGCATTTTGAATCTCTCACATTTACATAATTAACAGACTTAAAGTGGGACCTTA
TTGCACACTATTGCATAGTAGAAAAGCTAGGCTAAAATCATTTGTCTAATATCCTCAAGATACCTTGACACATTAGACCGAGTTGACAAGGGCGT
TTCAGCACCAGAAAGCTCTTTTATTGTCCTAAGTAGACTCCACTTTCTGACATGGTCTATTTCTCTTCGATTTCTGTAGTCCAGTTACTGGACTG
ACGATAGCTTCACTTCCTGGTTTTTCCCAAAACGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396092] SGN-U577427 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197418 [Download][View] Facility Assigned ID: FA0AAD7AC04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5