EST details — SGN-C175020
Search information |
Request: 175020 | Match: SGN-C175020 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C175020 | Clone name: TUS-20-E2 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175020 is on microarray TOM1 spot ID 1-1-7.1.14.20 [Order] [Tomato Microarray Database]
See unigene SGN-U575308 for alternative clones/ESTs which are mapped
Additional sequencing |
Clone: SGN-C23863 [cLED-6-I5] | Trace: SGN-T50215 | EST: SGN-E233229 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175020 [TUS-20-E2] | Trace: SGN-T189897 | EST: SGN-E377686 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E377687 | Length: 522 bp (930 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E377687 [] (trimmed)
CCGAAACCAGCTCCATCTCCTCCATCGCCAGTCAAGCCACCTACTACTTGTGATGATATGTACAGTTGCCCATCAGGAACAACGTGTTGCTGTGT
CTACGAGTACTATCACATGTGCTTTGCTTGGGGTTGCTGCCCTATGGAAGGAGCTACTTGCTGTAAAGACCATAACAGTTGCTGCCCACATGATT
ATCCTGTCTGCAATGTTAAAGCCGGCACCTGCTCAATCAGCGAGAATAACCCTCTTTCAGTCAAAGCAATGTCACACATTCTTGCCAAACCTATT
GGATCCTTCAGCAATCAGGGAATGAAAAACACTATCTCTTGAAGTGTCTCCAATGGGAATGCGCAAATTCGCAGTGAATTTGCAAAACCTCATTT
CCAGCTGAAAGTTTATAGTTATAGGTGATTCCAAAAGCAGAGGATAACAGAGTTGCTGCTGATTTCTGTATAGTGCTTCTTTAGTGCTTGTCACA
CAATGCACTAGAACAATATTGAAACAAGATTTCATTGTTCTGCTGTT
CTACGAGTACTATCACATGTGCTTTGCTTGGGGTTGCTGCCCTATGGAAGGAGCTACTTGCTGTAAAGACCATAACAGTTGCTGCCCACATGATT
ATCCTGTCTGCAATGTTAAAGCCGGCACCTGCTCAATCAGCGAGAATAACCCTCTTTCAGTCAAAGCAATGTCACACATTCTTGCCAAACCTATT
GGATCCTTCAGCAATCAGGGAATGAAAAACACTATCTCTTGAAGTGTCTCCAATGGGAATGCGCAAATTCGCAGTGAATTTGCAAAACCTCATTT
CCAGCTGAAAGTTTATAGTTATAGGTGATTCCAAAAGCAGAGGATAACAGAGTTGCTGCTGATTTCTGTATAGTGCTTCTTTAGTGCTTGTCACA
CAATGCACTAGAACAATATTGAAACAAGATTTCATTGTTCTGCTGTT
Unigenes |
Current Unigene builds | |||||
[SGN-E377687] | SGN-U575308 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T189898 [Download][View] | Facility Assigned ID: FA0AAD8BC01RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0006 | Quality Trim Threshold: 12.5 |