EST details — SGN-C175247

Search information 
Request: 175247Match: SGN-C175247
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175247Clone name: TUS-20-N13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175247 is on microarray TOM1 spot ID 1-1-4.2.13.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24169 [cLED-7-G21] Trace: SGN-T50315 EST: SGN-E231806 Direction: 5' Facility: TIGR
Clone: SGN-C175247 [TUS-20-N13] Trace: SGN-T190005 EST: SGN-E377506 Direction: 3' Facility: INRA
Clone: SGN-C175247 [TUS-20-N13] Trace: SGN-T190006 EST: SGN-E377507 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378672Length: 835 bp (1141 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378672 [] (trimmed) AACCAGCTATACCACCCACCCATGCACCCACCCACCTATCTAAACCATATTTTTTCCCTTTAATCTAATGGAGCTTCTCTTAGTATTCTCCCAAT
GTCCACCATTCCCTCCGCCGCCTACGGCGGTCCACCACCACCTCTAACCACCACCAATACGCTCATCGAGAGCCTCAACAAAATAGGCCTCGGCT
ACGCAATTGCAATTGCCCTTGCCTTCCTCTTCCTCCTATCAACTCTCATCCTTTCATCTTACCTATGCTGCCGCTCCGCTGCCTATCGCCGCCGT
CAAGCCCAATCCCAGTCTCGAAACCCGAACACCGGAATTTACATTCCGAGTGTAATTTTCGTTGCTGAGGAAGACGAAAACGACGACGTTTCATC
TCAGAACACTTTCGCGGGCCTCAATCAAGCAGTAATCAACTCTTACCCTAAATTAATTTACTCAAGCAGAAACGGAAATTGGGGAAACGGAAACG
GAAGCAGAAACGACGTCGTGTGTGCGATTTGTTTGTGCGATTACAAGGAAGCGGAGATGTTACGGATGTTACCTGAGTGTAAGCATTATTTTCAT
GTGATGTGCGTAGATGCGTGGCTGAAATTGAATGCTTCATGTCCAGTCTGCCGGAACTCGCCGTTGCCGACGCCGATGTCCACGCCGTTGTCGGA
GGTGGTCCCACTTTCACAATATTCCGATGGTCGGAGAAGACATTGATGACTGANAATAGATGAGGAAGCGCTTGGAATTTTCTTTTGTGTAATTT
GAAATTGGAATTTCTGTTGAGTATTAGTCATTCTCTGATTTTAGATTTCAAAGAAAGAATATATTTCTAGATCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378672] SGN-U582064 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1356 [Download] [View] Facility Assigned ID: TUS20N13.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.993 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5