EST details — SGN-C175268
Search information |
Request: 175268 | Match: SGN-C175268 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C175268 | Clone name: TUS-20-O10 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175268 is on microarray TOM1 spot ID 1-1-7.3.13.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C24208 [cLED-7-I17] | Trace: SGN-T50480 | EST: SGN-E231971 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175268 [TUS-20-O10] | Trace: SGN-T189872 | EST: SGN-E377661 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E377662 | Length: 668 bp (936 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E377662 [] (trimmed)
CAGGTTGCATCAAGTTCTTGGAAACAGTTGGTCTGCTATTGCAGCAAGATTACCCGGAAGAACAGATAACGAAATAAAAAACATTTGGCATACTC
GTCTGAAGAAAAAAAGGAATGAATCTCAACTTAAAGAAACCCAATCGGAGCCTGAAAATACTAATGTAGATGTACATTTGGAGGAGGCCAACAAT
TCTAATGATAAACATTCCGAAATATCGAATCTTAAAATAAACATCGAAATCCAACAACAACCAAGTCCATCATCGTCAGTATCATCATCAAGTGA
AGATTCATGTTCAAATACAACTGCAACGAGTTCAGAGTCGAGAAATCAAATAATGTCCGATAATTTGTTAGAAATTGATGACGATATTTGGTCCG
AGGTAGTATGGGCACAAGTCGATGACAATTATGTTGATTTGTCATTAATGGAGGATAATTACCACATTAATTCTAGCTTTGATGATAATTGGTTT
TGGGATGATCTTTTTACAAGATCTAATGAGTTGATGTTAGAATTGCCTGAATTATGAGCAACAAAAAAAAAAAAGGAAAAAAATGTTGAGTTCTT
TTTTTCTCTTTTTTTTTTCGGCGTAGAATTATTAATAAATAGTGTGGAGGGGTTTTTTTTTTTTATTGTTAATGGCCGACAGATTAGTGATAATA
AAT
GTCTGAAGAAAAAAAGGAATGAATCTCAACTTAAAGAAACCCAATCGGAGCCTGAAAATACTAATGTAGATGTACATTTGGAGGAGGCCAACAAT
TCTAATGATAAACATTCCGAAATATCGAATCTTAAAATAAACATCGAAATCCAACAACAACCAAGTCCATCATCGTCAGTATCATCATCAAGTGA
AGATTCATGTTCAAATACAACTGCAACGAGTTCAGAGTCGAGAAATCAAATAATGTCCGATAATTTGTTAGAAATTGATGACGATATTTGGTCCG
AGGTAGTATGGGCACAAGTCGATGACAATTATGTTGATTTGTCATTAATGGAGGATAATTACCACATTAATTCTAGCTTTGATGATAATTGGTTT
TGGGATGATCTTTTTACAAGATCTAATGAGTTGATGTTAGAATTGCCTGAATTATGAGCAACAAAAAAAAAAAAGGAAAAAAATGTTGAGTTCTT
TTTTTCTCTTTTTTTTTTCGGCGTAGAATTATTAATAAATAGTGTGGAGGGGTTTTTTTTTTTTATTGTTAATGGCCGACAGATTAGTGATAATA
AAT
Unigenes |
Current Unigene builds | |||||
[SGN-E377662] | SGN-U564591 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T189873 [Download][View] | Facility Assigned ID: FA0AAD8BH05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.936 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 14.5 |