EST details — SGN-C175347

Search information 
Request: 175347Match: SGN-C175347
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175347Clone name: TUS-21-B17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175347 is on microarray TOM1 spot ID 1-1-8.2.13.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24341 [cLED-7-O18] Trace: SGN-T50380 EST: SGN-E231871 Direction: 5' Facility: TIGR
Clone: SGN-C175347 [TUS-21-B17] Trace: SGN-T190572 EST: SGN-E377810 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377811Length: 666 bp (915 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377811 [] (trimmed) CTGCTATCTTATCTATATTCTGACTGAGATGTCTGGCAGTACATCTATGGTTTTCACTCGCACATGTGATGCAACTCGTCTTCTGGCTTTGATGC
TTCGCAACCTAGGCTTGAGAGCCATACCAATTAGTGGTCAGATGACTCAGGATAAAAGGCTTGGAGCTCTAAACAAATTTAAGGCCGGAGAGTGC
AATATCCTTATATGCACTGATGTGGCCAGTCGAGGACTTGATATACCGTCTGTTGATATGGTTATCAACTATGATATTCCAACAAACTCAAAGGA
TTATATACATAGAGTGGGAAGAACTGCACGAGCAGGACGTTCCGGGGTTGCCATATCATTAGTAAATCAGTATGAGTTGGAGTGGTATATACAGA
TAGAAAAGCTTATTGGGAAGAAACTACCCGAGTATCCCGCAGAGGAAGAGGAGGTTTTGCTACTCTTGGAGCGTGTCACAGAAGCCAAAAGGATC
TCATTGATGAAAATCAAAGAAACTGGTGGGAAAAGGAAACACAGAGGTGGTGGAGATGATGGTGACGATCAAGAGGTTCATAAATACTTGGGAGT
TAATAAGAAGGGAAAACAATCAAAGAAGCCAAAGAGAAAATGAGGGAATTAATGTGTAAACTAATTTAGNCATTGTTTAGTCCAATTTTGACTTG
G
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377811] SGN-U571014 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190573 [Download][View] Facility Assigned ID: FA0AAD9CA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0186 Quality Trim Threshold: 14.5