EST details — SGN-C175347
Search information |
Request: 175347 | Match: SGN-C175347 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C175347 | Clone name: TUS-21-B17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175347 is on microarray TOM1 spot ID 1-1-8.2.13.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C24341 [cLED-7-O18] | Trace: SGN-T50380 | EST: SGN-E231871 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175347 [TUS-21-B17] | Trace: SGN-T190572 | EST: SGN-E377810 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E377811 | Length: 666 bp (915 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E377811 [] (trimmed)
CTGCTATCTTATCTATATTCTGACTGAGATGTCTGGCAGTACATCTATGGTTTTCACTCGCACATGTGATGCAACTCGTCTTCTGGCTTTGATGC
TTCGCAACCTAGGCTTGAGAGCCATACCAATTAGTGGTCAGATGACTCAGGATAAAAGGCTTGGAGCTCTAAACAAATTTAAGGCCGGAGAGTGC
AATATCCTTATATGCACTGATGTGGCCAGTCGAGGACTTGATATACCGTCTGTTGATATGGTTATCAACTATGATATTCCAACAAACTCAAAGGA
TTATATACATAGAGTGGGAAGAACTGCACGAGCAGGACGTTCCGGGGTTGCCATATCATTAGTAAATCAGTATGAGTTGGAGTGGTATATACAGA
TAGAAAAGCTTATTGGGAAGAAACTACCCGAGTATCCCGCAGAGGAAGAGGAGGTTTTGCTACTCTTGGAGCGTGTCACAGAAGCCAAAAGGATC
TCATTGATGAAAATCAAAGAAACTGGTGGGAAAAGGAAACACAGAGGTGGTGGAGATGATGGTGACGATCAAGAGGTTCATAAATACTTGGGAGT
TAATAAGAAGGGAAAACAATCAAAGAAGCCAAAGAGAAAATGAGGGAATTAATGTGTAAACTAATTTAGNCATTGTTTAGTCCAATTTTGACTTG
G
TTCGCAACCTAGGCTTGAGAGCCATACCAATTAGTGGTCAGATGACTCAGGATAAAAGGCTTGGAGCTCTAAACAAATTTAAGGCCGGAGAGTGC
AATATCCTTATATGCACTGATGTGGCCAGTCGAGGACTTGATATACCGTCTGTTGATATGGTTATCAACTATGATATTCCAACAAACTCAAAGGA
TTATATACATAGAGTGGGAAGAACTGCACGAGCAGGACGTTCCGGGGTTGCCATATCATTAGTAAATCAGTATGAGTTGGAGTGGTATATACAGA
TAGAAAAGCTTATTGGGAAGAAACTACCCGAGTATCCCGCAGAGGAAGAGGAGGTTTTGCTACTCTTGGAGCGTGTCACAGAAGCCAAAAGGATC
TCATTGATGAAAATCAAAGAAACTGGTGGGAAAAGGAAACACAGAGGTGGTGGAGATGATGGTGACGATCAAGAGGTTCATAAATACTTGGGAGT
TAATAAGAAGGGAAAACAATCAAAGAAGCCAAAGAGAAAATGAGGGAATTAATGTGTAAACTAATTTAGNCATTGTTTAGTCCAATTTTGACTTG
G
Unigenes |
Current Unigene builds | |||||
[SGN-E377811] | SGN-U571014 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T190573 [Download][View] | Facility Assigned ID: FA0AAD9CA09RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.965 | Expected Error Rate: 0.0186 | Quality Trim Threshold: 14.5 |