EST details — SGN-C175816

Search information 
Request: 175816Match: SGN-C175816
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175816Clone name: TUS-22-F6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175816 is on microarray TOM1 spot ID 1-1-3.2.11.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16852 [cLED-17-M21] Trace: SGN-T52942 EST: SGN-E238500 Direction: 5' Facility: TIGR
Clone: SGN-C175816 [TUS-22-F6] Trace: SGN-T180823 EST: SGN-E368641 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368642Length: 670 bp (943 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368642 [] (trimmed) CAGGATGGTTGGGTGATAGAAGAGGTACCACGTACAGACGGAAGCAGCATGGTGGATAAGTATTACTATGAACCAGGTAGTGGACAAAAATTTAG
ATCCAGGATAGCGGCACAAAGATACTTGGCTCAAATGAGAGAAAATGTTCCTTTGTCCGCTACTCTAGAAGAATTGAAAGAGAATAAACCACTGT
CCAAGATGTTTAAGTTGTACCATCATGCAAAGAAATCTCTTCCATGTAAGAGGAACATCGTTACAGAGAATTCATCGTTTCTTTCTCCACCAGCA
AAAGTAAATTGGGTTCTTTCTAGTCCTAAAGGGGATGCTTGGAATCCTTTGATTTCTGGAACACCTATTCCTGATTCACTAAAACAACAATGGAC
TAAAAGATTCAAGTTGTTCATGAATGACGAGAACCTGAATGCAGAAAAGTCAGACTAGAAAGGCACTAAACGGAGAGAATGCAGTTGAAAGCTCG
GACTGCTTCTGACCTATGAGAATTGGATGCTGAATCTTGTACATACTAACATTATGCAACTCCTTAATCACTTTGCTGTTTAACCACTGTAGAGA
ATCTGTTGTCCTGTTTATTCTGTGTTTGTTCATGTGTTGTATAACAATTCGACAACTTTTTTTCTTATGGACATGTTCAAGTACGGATGTACAAT
TAAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368642] SGN-U586525 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180824 [Download][View] Facility Assigned ID: FA0AAD10DC03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5