EST details — SGN-C175981

Search information 
Request: 175981Match: SGN-C175981
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175981Clone name: TUS-22-M3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175981 is on microarray TOM1 spot ID 1-1-6.1.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18614 [cLED-24-B10] Trace: SGN-T54734 EST: SGN-E240837 Direction: 5' Facility: TIGR
Clone: SGN-C175981 [TUS-22-M3] Trace: SGN-T180462 EST: SGN-E367848 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367849Length: 660 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E367849 [] (trimmed) TTCAACAATAGATGTAGTGGCTAAGGTGCTCTGTGACAAAAGTGGAGTTTTTGATGCCTTGGAATTCGTGAGAGCTGTAATAAAGAAGCACGATA
TTGTACCAAGAAAGACAACGTATGAACTTCTGATACAGAGCTTGTGTAAGGAGGGGTGGATGGAAGAAGCTCTGAAACTTCAGGTAGAGATGGTG
GGCAAAGGATATGAACCAAATTTTGAAATATATAGTGCTTTCATTGATGGGTACATCAAGCAAGGGGATGAAGAAAAGGCTGAAACTTTGAGGAA
TGAAGTGCTTAGGAATACGATACCATGTAAAGACAGCTAGAAGTTGAGTTTTGACCAAATTTTAAATCGTGATTTCTGGATATGAGGTCAAGAAA
AGACAAACAGACTTGGCCAAAGTGCAAGTCTGTCAGTAAATCAAAACAATGTACTCTCTGGACGGCACCTTCATGATTTGGGGGAAATAATCACT
ACATTCTTGCTGAAACACTTCAATTCCATACCGTAGTGGTCTTATGATGATTTTTGCTACCCTTCTGAGGATGGTACTTCTCTAAGGACATAGAT
AATAGGTTTATGAATATGAGCACTGCCTAACTTCTTGAGGAGGCCCCCGCTACAGTACCATGAGAAGATTGACACTCTTAAGTGCAAAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367849] SGN-U570436 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180463 [Download][View] Facility Assigned ID: FA0AAD10AG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5