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EST details — SGN-C176232

Search information 
Request: 176232Match: SGN-C176232
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176232Clone name: TUS-23-G14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176232 is on microarray TOM1 spot ID 1-1-3.3.11.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21628 [cLED-34-K19] Trace: SGN-T57334 EST: SGN-E243560 Direction: 5' Facility: TIGR
Clone: SGN-C176232 [TUS-23-G14] Trace: SGN-T181139 EST: SGN-E369101 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369102Length: 572 bp (929 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369102 [] (trimmed) AAGGAGCCTAAGTTCTTGAAGAATGGTGATGCTGGTATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCTTTGCCGAATACCCACC
ATTGGGTCGTTTTGCTGTGAGGGACATGAGGCAAACTGTTGCTGTGGGTGTTGTCAAGAATGTTGACAAGAAGGACCCAACTGGTGCCAAGGTCA
CCAAGGCTGCCCAGAAGAAGGGAAAGTAGAGTGCATTTGATGAGCACGGATGAAATAGTTTTGTTTATTTGCATCAGTTTTTTTCATTTTTGTTT
TGGACAGCATTTTGCCAGTTTTGGATATGGCTACAGAAGGTATTGTCATGGTTCTCTAGCCTCTTTTTGAGGATAGTGGAGTAATTGAGCAATTA
TGTCGGGACCAAATTACTTGATGGGCAATGACATATAGCTCTGTTGGTTGTTCCTTTACCTGGGTTAAATCACTTTACACACAGTCTTGGTCACT
GCTCAACTTATTTAAGTTTATGAAATTTTGAGTATATTTCCTTCTAAGATCTTGTTCCTGTTTCATGGTATTAGATTTTTCTTTTGGTTCGTGAA
AA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369102] SGN-U578520 Tomato 200607 Build 2 144 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181140 [Download][View] Facility Assigned ID: FA0AAD11BD07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0007 Quality Trim Threshold: 12.5