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EST details — SGN-C176309

Search information 
Request: 176309Match: SGN-C176309
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176309Clone name: TUS-23-J19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176309 is on microarray TOM1 spot ID 1-1-6.2.10.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26415 [cLEF-40-F11] Trace: SGN-T60146 EST: SGN-E246294 Direction: 5' Facility: TIGR
Clone: SGN-C176309 [TUS-23-J19] Trace: SGN-T181305 EST: SGN-E368378 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368379Length: 646 bp (919 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368379 [] (trimmed) CAGGCAAAAGTTTGAGTATATATCACTGCAATAGGTTCTCAATATGCCACACAAATAGGAAAGAAATGTATGTCCACTATACATTTTTCTTCTGA
GTTCTTTAGTGATATATGCATCTTAACAGACACTTTTAAGTGTCACTAATAGGTATTGCTACAAGCAGTTTGGACCTTCAACTATAAATAGCTTG
TCATTATCTCTTATTACTTCAATTGAGTCAATTTCTGATCCTTCTTGATCCGTAATCGATGCATTTGTTGCATCAAATCCAAATTTCTGACCTGC
AATGATCTTGAGCTCTGCAAGTGAATTTGGAAGCGTAATTAATTTGCCAGGTTCACTGCAATGAGTTCTTCTCCTGATAACAGGATGGCCTCTGT
ATATGCTAACTCTAAAAGACATTTGATCCCTAGTGCTTTCTGAATTGTGTTGCTTCTCTTGTTGGCGCCATTTTTGAGCAACTTCATCCATTGTG
TCGGATACCATAATTCTGTGTCCTACTTCGCGCTTTTGTAGCATGTCATTTAGGTTCATTGAAGAAAGCTTGTACTTTAACTTATCGTTTATCTC
AGCTCCATTCATTAGAAGTAGCTTTACCATGTCTTCAAGATTTTCTTCCAGTGCAACATGAATAGCAGTTGATCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368379] SGN-U568026 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181306 [Download][View] Facility Assigned ID: FA0AAD11CE10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5