EST details — SGN-C176351
Search information |
Request: 176351 | Match: SGN-C176351 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C176351 | Clone name: TUS-23-L13 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176351 is on microarray TOM1 spot ID 1-1-4.4.10.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C26548 [cLEF-40-M16] | Trace: SGN-T60134 | EST: SGN-E246282 | Direction: 5' | Facility: TIGR |
Clone: SGN-C176351 [TUS-23-L13] | Trace: SGN-T181380 | EST: SGN-E368453 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E368454 | Length: 628 bp (927 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E368454 [] (trimmed)
GAGTTTTAAATTCTTTGAACAAAGAAAAAAAAATCTAATCACTTTTTGTATTAAAGTTTGCTGGAGATTTGTATTTAATTTGTCGACAAGACAGG
AAAAATTCTGGGGTGTTAAGTTTTTCTTGATCGTTTTTTGGTGGTATTGAAGTTATGGAAGACAAAAGCAATGATTATTATGCAGTTTTGGGGTT
GAAGAAGGAATGCACTGACACAGAACTTAGGAATGCCTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTTCAGCATCGGGGAATTTGA
AGTTTGTAGATGAAGCAAAGAAGCAATTTCAGGCAATTCAAGAAGCATATTCTGTGTTATCGGATGCAAACAAAAAGTTTTTGTACGATGTAGGA
GTTTATGACTCTGGTGATGATGACGACGAAAATGGCATGGGTGATTTCCTGAATGAAATGGCAGCTATGATGAGCCAAAATAAGTCCAATGAAAA
TCAGGGAGAAGAAACCTTTGAGGAATTGCAGGATATGTTTAATGAAATGTTCAACAGTGATAATGGAACGTTTTCTTCTTCTTCTTCTTCTTCTT
TCTTCTTCTTGGACTGGAACTCCTTCAATGTGCTCTACTACATCATCTACATCTTCAA
AAAAATTCTGGGGTGTTAAGTTTTTCTTGATCGTTTTTTGGTGGTATTGAAGTTATGGAAGACAAAAGCAATGATTATTATGCAGTTTTGGGGTT
GAAGAAGGAATGCACTGACACAGAACTTAGGAATGCCTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTTCAGCATCGGGGAATTTGA
AGTTTGTAGATGAAGCAAAGAAGCAATTTCAGGCAATTCAAGAAGCATATTCTGTGTTATCGGATGCAAACAAAAAGTTTTTGTACGATGTAGGA
GTTTATGACTCTGGTGATGATGACGACGAAAATGGCATGGGTGATTTCCTGAATGAAATGGCAGCTATGATGAGCCAAAATAAGTCCAATGAAAA
TCAGGGAGAAGAAACCTTTGAGGAATTGCAGGATATGTTTAATGAAATGTTCAACAGTGATAATGGAACGTTTTCTTCTTCTTCTTCTTCTTCTT
TCTTCTTCTTGGACTGGAACTCCTTCAATGTGCTCTACTACATCATCTACATCTTCAA
Unigenes |
Current Unigene builds | |||||
[SGN-E368454] | SGN-U572726 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T181381 [Download][View] | Facility Assigned ID: FA0AAD11CF07RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.940 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 14.5 |