EST details — SGN-C177652

Search information 
Request: 177652Match: SGN-C177652
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177652Clone name: TUS-27-B18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177652 is on microarray TOM1 spot ID 1-1-7.2.6.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46851 [cLEI-13-O13] Trace: SGN-T82568 EST: SGN-E268507 Direction: 5' Facility: TIGR
Clone: SGN-C177652 [TUS-27-B18] Trace: SGN-T193252 EST: SGN-E391926 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396506Length: 408 bp (845 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396506 [] (trimmed) GGCTTCGGGCTTTCTGCCACTCCACCCTTCTCTATATCGACCTTAGCTTTACATCACATTTTTAACAAGCACCTTAATTCTATTACTTCTTTGTT
CCCTCCATTTCCCTGTTTGATTGGAGTCTATTATCATTTTCCCCAAAAACCAGAAAAAAGTAGACATTTTTCCTTTATATGTAATGAAATGAAAG
CATTTTAAGGTACCCCTCTTGGAGTTTCTTCAGAGTTATAAGTTCTGAGTTTGGCTTAAAACACTTTTCTTGCATGGAAGACAAAGTTTGTTACT
TTCAAGATTTTGTCTACTCAAACTAATTTTCAAGCTTTTTTCTCTTTTTTTTTTGGGTTTGAATGATATGGGGGTCTTCAAGAATTTGTTTGTGT
GACAAAGTTGTTTTCATTGAAACACTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396506] SGN-U576476 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197832 [Download][View] Facility Assigned ID: FA0AAD15DA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.923 Expected Error Rate: 0.0372 Quality Trim Threshold: 14.5