EST details — SGN-C177769

Search information 
Request: 177769Match: SGN-C177769
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177769Clone name: TUS-27-G15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177769 is on microarray TOM1 spot ID 1-1-2.3.6.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C62120 [cLEM-1-I20] Trace: SGN-T83731 EST: SGN-E270358 Direction: 5' Facility: TIGR
Clone: SGN-C177769 [TUS-27-G15] Trace: SGN-T182788 EST: SGN-E371280 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E371281Length: 663 bp (928 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E371281 [] (trimmed) GGTTTTCCCTTAGGGTTTTATAGCTGTCTACTCCTCCCAGCTGCTTTTTTTCCCCCACAACTTGTAATGGGTAAATCTATCAAGAAGTCCGCCAC
CAAGGCTGATGCTGCTGTAGTTGCTCCAACCAAATCCATGAAGAAAGGGAAGAGAGAAGCTGAGGATGAAATTGCCAAGTTGGTGAGTGCAAAGA
AGCAGAAGAAAGATGTGGCTGTAGCACAAGCTGTTGAGAAAAAGAAAAGTGATCTCAAAACTCAGAAGAAGAAGAAGCCAGTAAGCAGTTCCTCT
GACGATAGCTCCTCTGAGTCGGAGTCTGAGGACGACAAGCCACTGGTGCCTCCTAAGAAAGTGGCTCCTGCCAAAAAGGGAAAGGTAGCCAGCAG
TTCTGATGACTCAGATTCTTCAGATGAGGATGAAGCTCCTGCTAAGAAAGTTGTTGTAGCTTCAACTAAGAATGGCGTTGCTGCTAAGAAGAAAG
ATGAGTCAAGTGATGATTCGGATGATAGCAGCTCTGAGGAAGATGTGCCTGCACCCAAGAAACCTCCTACTAATGGCGCTAAGAAAGACAAGTCA
AGTGATGATTCTGATGATAGCAGCTCTGAGGATGATGCTGTTGTTAAGAAGGCACCTGCTGTTGTTAAGAAGGCGCCTGCTGCTGCCTCTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E371281] SGN-U572167 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182789 [Download][View] Facility Assigned ID: FA0AAD15AD08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5