EST details — SGN-C177833

Search information 
Request: 177833Match: SGN-C177833
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177833Clone name: TUS-27-J7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177833 is on microarray TOM1 spot ID 1-1-2.2.6.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64094 [cLEM-5-B4] Trace: SGN-T85262 EST: SGN-E271457 Direction: 5' Facility: TIGR
Clone: SGN-C177833 [TUS-27-J7] Trace: SGN-T183160 EST: SGN-E370923 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370924Length: 701 bp (893 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370924 [] (trimmed) GCAGATCCATTCAACTTCCAATTCAGATTCACAAAATGGCTACAGAACCCAAGAAGATCATCATTGACACTGATCCTGGAATTGATGATGCAATG
GCGATATTTGTGGCATTGGAATCTCCTGAAGTTGAGGTGATCGGGCTTACAACGATATATGGAAATGTCTACACAACTCTAGCTACCAGAAATGC
TTTACATCTGTTGGATATAGCTGGGAGGACAGATATTCCGGTGGCTGAAGGCTCTCATGTTACAATCACTAAAGGTACAAAACTTCGAATTGCTG
ATTTTGTTCATGGCACGGATGGACTTGGAAACCAAAACTTTCCTGCACCAAATGGAAAACCTATTGAACAGAATGCTGCTGACTTTCTTGTTCAA
CAAGCCAGTCTATACCCCGGAAAGATTACTGTTGTAGCTTTGGGTCCCTTGACAAATATAGCACTAGCCATTCAATCAGATCCTGATTTTGTTAA
AAACATTGGACAAATTGTTGTTCTTGGTGGTGCCTTTTCTGTAAACGGAAATGTCAATCCAGCTGCTGAGGCGAATATCTTTGGAGATCCAGATG
CTGCTGATATTGTATTTACTAGCGGTGCTGATGTTCTAGCAGTTGGAATAAATGTTACACATCAAGTTGTCCTTACTGATTTTGATCGAGACGAG
TTGGCAAAGTCTAACGGAAAGTATGCCCAGTACCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370924] SGN-U583670 Tomato 200607 Build 2 45 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183161 [Download][View] Facility Assigned ID: FA0AAD15CE04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5