EST details — SGN-C178168

Search information 
Request: 178168Match: SGN-C178168
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C178168Clone name: TUS-28-H6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178168 is on microarray TOM1 spot ID 1-1-3.4.4.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64660 [cLEM-6-M24] Trace: SGN-T84618 EST: SGN-E270862 Direction: 5' Facility: TIGR
Clone: SGN-C178168 [TUS-28-H6] Trace: SGN-T183710 EST: SGN-E370778 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370779Length: 700 bp (920 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370779 [] (trimmed) GGTCTCACTTGCCTTTCAGAGGATAACCGGAGCGGCGACCACCTTGCTTGACAAAATGGCGCAAGAATCACTTGTCCTTCGCGGCACCATGAAAG
CCCACACCGATTGGGTCACTGCCATCGCCACCCCAATTGATAACTCTGACATGATTGTTACTTCCTCCAGGGACAAGTCCATCATTGTCTGGTCT
CTCACCAAGGATGGCGCACAGTACGGTGTCCCCCGCCGCCGTCTCACAGGCCACGGCCACTTTGTTCAGGATGTTGTTCTCTCCTCCGACGGTAT
GTTTGCTCTCTCTGGTTCTTGGGATGGAGAGCTTCGCCTTTGGGATCTTCAAGCCGGCACTACTGCTCGCCGTTTTGTTGGTCACACTAAGGATG
TTCTCTCCGTTGCTTTTTCCGTTGATAACCGTCAGATTGTGTCCGCTTCACGGGACAAGTCTATCAAGTTGTGGAACACTCTCGGTGAGTGTAAA
TACACCATTCAGGACGGAGACTCACACTCCGATTGGGTTTCGTGTGTGCGTTTCAGCCCAAACACTCTCCAGCCAACTATTGTTTCTGGTTCCTG
GGATCGTACTGTGAAAATCTGGAACCTCACCAACTGTAAGCTGCGTTCGACTCTTGCTGGACACTCTGGCTATGTGAACACTGTGGCAGTGTCAC
CTGATGGTTCCTTGTGCGCTAGGGGTGGGAAGGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370779] SGN-U582604 Tomato 200607 Build 2 93 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183711 [Download][View] Facility Assigned ID: FA0AAD16DD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5